RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 FAM24AA6NFZ4 105 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 PMS2P5A8MQ11 134 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 BUB3O43684 328 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 COX7A2P2O60397 106 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 MPDU1O75352 247 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 HYPMO75409 117 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 CCNKO75909 580 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 APOHP02749 345 aaPredicted RBP4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR5G3P0C626 314 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 ID1P41134 155 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 CAMLGP49069 296 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 MEOX2P50222 304 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 H2BFSP57053 126 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 EWSR1Q01844 656 aaKnown RBP eCLIP4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 FGL1Q08830 312 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 FAM90A2PQ658T7 463 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 C16orf54Q6UWD8 224 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 Q6ZRG5 221 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 TMEM252Q8N6L7 170 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZNF709Q8N972 641 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 GLMPQ8WWB7 406 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZNF414Q96IQ9 312 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 SPATA25Q9BR10 227 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 ARL6Q9H0F7 186 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 WFDC10AQ9H1F0 79 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 SLC25A22Q9H936 323 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 NRN1Q9NPD7 142 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 C19orf73Q9NVV2 129 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 DOK5Q9P104 306 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 U3KQK5 164 aa4.04□□□□□ -1.76
HMGB1P40-201ENST00000525121 IGKV1OR2-108A0A075B7D4 117 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 ELOA3CA0A087WX78 387 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 C17orf112F2Z3M2 114 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 K7EQG2 157 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 UBE2CO00762 179 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 AGPAT2O15120 278 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 MPC2O95563 127 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 IFNA5P01569 189 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 GIPP09681 153 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 ZNF688P0C7X2 276 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 RPL7P18124 248 aaKnown RBP4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 ATF4P18848 351 aaPredicted RBP4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 FGF7P21781 194 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 DEFB131AP59861 70 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 ARL16Q0P5N6 197 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 IL15RAQ13261 267 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 CLINT1Q14677 625 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 ODF3L2Q3SX64 289 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 C10orf113Q5VZT2 155 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 SBSPONQ8IVN8 264 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 STHQ8IWL8 128 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR5C1Q8NGR4 320 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR1L4Q8NGR5 311 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 LRRC20Q8TCA0 184 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 SCGB1C1Q8TD33 95 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 PFDN5Q99471 154 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 C11orf1Q9H5F2 150 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 MAP6D1Q9H9H5 199 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 OR5AC2Q9NZP5 309 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 MBD2Q9UBB5 411 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 WDR83OSQ9Y284 106 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 U3KQE9 123 aa4.03□□□□□ -1.76
HMGB1P40-201ENST00000525121 KIR2DL5BA0A0G2JN68 375 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 KIR2DL5BA0A0G2JPC4 375 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 RBMY1BA6NDE4 496 aaKnown RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 RBMY1EA6NEQ0 496 aaKnown RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 ZNF98A6NK75 572 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 H3BRN7 92 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 RBMY1DP0C7P1 496 aaKnown RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 RPL35AP18077 110 aaKnown RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 GATA2P23769 480 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 RPL12P30050 165 aaKnown RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 PSMB3P49720 205 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 PLP1P60201 277 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 B2MP61769 119 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 NUTF2P61970 127 aaKnown RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 NHLH2Q02577 135 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 OXA1LQ15070 435 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 FCN2Q15485 313 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 HAGHQ16775 308 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 VWC2Q2TAL6 325 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 PSMG4Q5JS54 123 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 LEMD1Q68G75 181 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 APRG1Q8IVJ8 170 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 KIR2DL5AQ8N109 375 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 INO80EQ8NBZ0 244 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 KIR2DL5BQ8NHK3 375 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 C16orf92Q96LL3 132 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 LINC00052Q96N35 136 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 RCHY1Q96PM5 261 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 MGST2Q99735 147 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 ATP5SQ99766 215 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 TM2D3Q9BRN9 247 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 SHANK2-AS3Q9BTD1 123 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 SCRT1Q9BWW7 348 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 SLC25A39Q9BZJ4 359 aaPredicted RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 ARV1Q9H2C2 271 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 SLC25A32Q9H2D1 315 aa4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 SEPSECSQ9HD40 501 aaKnown RBP4.02□□□□□ -1.77
HMGB1P40-201ENST00000525121 HSPB11Q9Y547 144 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms