RNA–Protein interactions for RNA: ENST00000523877.1

SDC2-208, Transcript of syndecan 2, humanhuman

TSL 5

Gene SDC2, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-208ENST00000523877 C16orf95Q9H693 158 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 GNB4Q9HAV0 340 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 HES2Q9Y543 173 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 COL3A1P02461 1466 aaPredicted RBP5.17□□□□□ -1.58
SDC2-208ENST00000523877 ZNF831Q5JPB2 1677 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 VWA8A3KMH1 1905 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 ALPK3Q96L96 1907 aa5.17□□□□□ -1.58
SDC2-208ENST00000523877 TRAV8-1A0A0A6YYK1 113 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 TRAV1-1A0A0B4J248 108 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 hDV102S1A0JD36 115 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 PPP1R3DO95685 299 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 SCGB1C2P0DMR2 95 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 CCL23P55773 120 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 ATP5EP56381 51 aaPredicted RBP5.16□□□□□ -1.58
SDC2-208ENST00000523877 CAV3P56539 151 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 LINC00310P59036 64 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 UBE2L3P68036 154 aaKnown RBP5.16□□□□□ -1.58
SDC2-208ENST00000523877 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 Q6ZS46 218 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 C2orf91Q6ZV80 131 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 HMGN2P46Q86SG4 172 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 SFTPA1Q8IWL2 248 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 RAB42Q8N4Z0 105 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 FGF13Q92913 245 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 DSCR8Q96T75 97 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 ARRDC1-AS1Q9H2J1 176 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 C11orf68Q9H3H3 251 aaKnown RBP5.16□□□□□ -1.58
SDC2-208ENST00000523877 DEPPQ9NTK1 212 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 TP53TG3Q9ULZ0 132 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 COL5A3P25940 1745 aaPredicted RBP5.16□□□□□ -1.58
SDC2-208ENST00000523877 SPTBN5Q9NRC6 3674 aaKnown RBP5.16□□□□□ -1.58
SDC2-208ENST00000523877 LAMA4Q16363 1823 aa5.16□□□□□ -1.58
SDC2-208ENST00000523877 MDFIC2A0A1B0GVS7 189 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 HCRTO43612 131 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 SRSF10O75494 262 aaKnown RBP5.15□□□□□ -1.59
SDC2-208ENST00000523877 HLA-DQA1P01909 254 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 APCSP02743 223 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 C1QAP02745 245 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 CR2P20023 1033 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 SRSF9Q13242 221 aaKnown RBP eCLIP5.15□□□□□ -1.59
SDC2-208ENST00000523877 CSRP2Q16527 193 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 RNASE12Q5GAN4 147 aaKnown RBP5.15□□□□□ -1.59
SDC2-208ENST00000523877 FAM222AQ5U5X8 452 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 DNM1P46Q6ZS02 220 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 Q6ZS49 121 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 VN1R4Q7Z5H5 301 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 SBSPONQ8IVN8 264 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 FAM57AQ8TBR7 257 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 ZNF799Q96GE5 643 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 SPACA5Q96QH8 159 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 PRR25Q96S07 402 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 HDHD3Q9BSH5 251 aaPredicted RBP5.15□□□□□ -1.59
SDC2-208ENST00000523877 CMC2Q9NRP2 79 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 CASP8AP2Q9UKL3 1982 aa5.15□□□□□ -1.59
SDC2-208ENST00000523877 GBF1Q92538 1859 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 TRAV1-2A0A0B4J238 106 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 KLF18A0A0U1RQI7 1052 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.14□□□□□ -1.59
SDC2-208ENST00000523877 A0A1W2PS18 150 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 TCL1BO95988 128 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 COL8A2P25067 703 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 PSMB2P49721 201 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 ERVK-16P61578 105 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 CFHR3Q02985 330 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 ABCA11PQ4W5N1 156 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 FAM78AQ5JUQ0 283 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 ZC2HC1BQ5TFG8 222 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 LGALS9CQ6DKI2 356 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 NEXN-AS1Q8NBZ9 246 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 CLDND2Q8NHS1 167 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 LRRC29Q8WV35 223 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 ZNF689Q96CS4 500 aaPredicted RBP5.14□□□□□ -1.59
SDC2-208ENST00000523877 SLC25A38Q96DW6 304 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 C2orf50Q96LR7 162 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 RNF126Q9BV68 326 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 HIGD1BQ9P298 99 aa5.14□□□□□ -1.59
SDC2-208ENST00000523877 DDX60Q8IY21 1712 aaKnown RBP5.14□□□□□ -1.59
SDC2-208ENST00000523877 CD163L1Q9NR16 1453 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 VCANP13611 3396 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 RANBP2P49792 3224 aaKnown RBP5.13□□□□□ -1.59
SDC2-208ENST00000523877 PGPA6NDG6 321 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 C15orf62A8K5M9 175 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 IGLL5B9A064 214 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 NGFP01138 241 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 CFPP27918 469 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 SSR2P43308 183 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 SNRPD3P62318 126 aaKnown RBP5.13□□□□□ -1.59
SDC2-208ENST00000523877 CCL8P80075 99 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 ADIGQ0VDE8 80 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 PAPPA-AS1Q5QFB9 102 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 NOXRED1Q6NXP6 359 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 NFE4Q86UQ8 179 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 PCP2Q8IVA1 136 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 POM121L12Q8N7R1 296 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 C10orf105Q8TEF2 133 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 KRTAP4-7Q9BYR0 210 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 R3HDMLQ9H3Y0 253 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 DPH3P1Q9H4G8 78 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 NRXN2Q9P2S2 1712 aa5.13□□□□□ -1.59
SDC2-208ENST00000523877 TICRRQ7Z2Z1 1910 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms