RNA–Protein interactions for RNA: ENST00000520497.1

VAPB-206, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 937 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-206ENST00000520497 C10orf99Q6UWK7 81 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 RNF152Q8N8N0 203 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 OR51G1Q8NGK1 321 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 OR1B1Q8NGR6 318 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 ZNF502Q8TBZ5 544 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 MYOZ3Q8TDC0 251 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 RXFP4Q8TDU9 374 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 WIPF2Q8TF74 440 aaPredicted RBP6.62□□□□□ -1.35
VAPB-206ENST00000520497 Q8WTZ3 238 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 CCDC140Q96MF4 163 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 C16orf95Q9H693 158 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 HIGD1AQ9Y241 93 aa6.62□□□□□ -1.35
VAPB-206ENST00000520497 PSMB11A5LHX3 300 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 TMEM250H0YL14 139 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 TCF21O43680 179 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 NDUFA7O95182 113 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 TRGV3P03979 118 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 ELANEP08246 267 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 SRP19P09132 144 aaKnown RBP6.61□□□□□ -1.35
VAPB-206ENST00000520497 ORM2P19652 201 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 GCHFRP30047 84 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 RAB9AP51151 201 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 CEBPGP53567 150 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 TPPP2P59282 170 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 PLP1P60201 277 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 LYZP61626 148 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 CCL20P78556 96 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 ZNF90Q03938 601 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 ATP5G2Q06055 141 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 FOXE3Q13461 319 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 KIAA0141Q14154 515 aaPredicted RBP6.61□□□□□ -1.35
VAPB-206ENST00000520497 TIGITQ495A1 244 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 GCSAMLQ5JQS6 135 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 C10orf91Q5T1B1 145 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 CST9LP1Q5W188 147 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 SSX7Q7RTT5 188 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 ZNF329Q86UD4 541 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 OR4F5Q8NH21 305 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 SPATA3Q8NHX4 192 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 ZNF414Q96IQ9 312 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 USMG5Q96IX5 58 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 MS4A10Q96PG2 267 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 OR4F4Q96R69 305 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 NIPSNAP3BQ9BS92 247 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 NKX6-2Q9C056 277 aaPredicted RBP6.61□□□□□ -1.35
VAPB-206ENST00000520497 KLK15Q9H2R5 256 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 DOK5Q9P104 306 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 S4R3C0 116 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 ATRQ13535 2644 aa6.61□□□□□ -1.35
VAPB-206ENST00000520497 A0A0G2JLM5 398 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 C11orf94C9JXX5 98 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 WIPF1O43516 503 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 PAGE4O60829 102 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 IGHV3-23P01764 117 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 CRYBA1P05813 215 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 PF4V1P10720 104 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 PSG1P11464 419 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 GATA2P23769 480 aaPredicted RBP6.6□□□□□ -1.35
VAPB-206ENST00000520497 ADMP35318 185 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 UBE2L3P68036 154 aaKnown RBP6.6□□□□□ -1.35
VAPB-206ENST00000520497 SLC35B1P78383 322 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 SRSF3P84103 164 aaKnown RBP6.6□□□□□ -1.35
VAPB-206ENST00000520497 RELQ04864 619 aaPredicted RBP6.6□□□□□ -1.35
VAPB-206ENST00000520497 PNRC1Q12796 327 aaPredicted RBP6.6□□□□□ -1.35
VAPB-206ENST00000520497 KRTAP24-1Q3LI83 254 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 LINC01559Q495D7 138 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 TEX38Q6PEX7 206 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 LCNL1Q6ZST4 164 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 MIR17HGQ75NE6 70 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 LINC00305Q7Z4B0 112 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 OR5AU1Q8NGC0 362 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 RNF125Q96EQ8 232 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 RARRES2Q99969 163 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 PAXXQ9BUH6 204 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 SEPSECSQ9HD40 501 aaKnown RBP6.6□□□□□ -1.35
VAPB-206ENST00000520497 PRELID1Q9Y255 219 aa6.6□□□□□ -1.35
VAPB-206ENST00000520497 COL6A5A8TX70 2615 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 OR2T8A6NH00 312 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 M0R036 132 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 BMPR1BO00238 502 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 CTSGP08311 255 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 GPR183P32249 361 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 RHEBQ15382 184 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 LCE2CQ5TA81 110 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 ZNF343Q6P1L6 599 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 ZNF600Q6ZNG1 722 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 KLHDC1Q8N7A1 406 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 ZNF491Q8N8L2 437 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 CYB561D1Q8N8Q1 229 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 LINC01006Q8NI28 216 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 RPUSD4Q96CM3 377 aaKnown RBP6.59□□□□□ -1.35
VAPB-206ENST00000520497 TVP23CQ96ET8 276 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 TCEAL7Q9BRU2 100 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 CHRDL1Q9BU40 450 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 SCRT1Q9BWW7 348 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 OR51M1Q9H341 326 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 TMPRSS5Q9H3S3 457 aa6.59□□□□□ -1.35
VAPB-206ENST00000520497 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP6.58□□□□□ -1.36
VAPB-206ENST00000520497 A0A1W2PRE2 83 aa6.58□□□□□ -1.36
VAPB-206ENST00000520497 ZNF727A8MUV8 499 aa6.58□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms