RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 HELTA6NFD8 242 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 DPRXA6NFQ7 191 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 C17orf51A8MQB3 221 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR11H12B2RN74 326 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TRAPPC2LH3BP13 241 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 K7EP34 96 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 SDCBPO00560 298 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 RER1O15258 196 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR7C2O60412 319 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF324O75467 553 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 KLF7O75840 302 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 DHRS3O75911 302 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 S1PR2O95136 353 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 HLA-HP01893 362 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 GYPAP02724 150 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR10J4P0C629 311 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 FGF6P10767 208 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 SLC25A6P12236 298 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 MSR1P21757 451 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 BLVRBP30043 206 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 CYB561P49447 251 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 PPOXP50336 477 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 PIGPP57054 158 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 MLF1P58340 268 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM267Q0VDI3 215 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 SLAQ13239 276 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR8B8Q15620 311 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 ADIRFQ15847 76 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 LRRC75BQ2VPJ9 315 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 MPV17L2Q567V2 206 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR10J3Q5JRS4 329 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 SPIN3Q5JUX0 258 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 SAMD13Q5VXD3 122 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 EBLN2Q6P2I7 272 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 C19orf35Q6ZS72 473 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TCF23Q7RTU1 214 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 MRPL21Q7Z2W9 205 aaKnown RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 SELENOHQ8IZQ5 122 aaKnown RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TCTEX1D1Q8N7M0 179 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR11H1Q8NG94 326 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR2Z1Q8NG97 314 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR51T1Q8NGJ9 327 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR1N2Q8NGR9 330 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 OR11H2Q8NH07 326 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 MRPL30Q8TCC3 161 aaKnown RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 C18orf32Q8TCD1 76 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 RTN4IP1Q8WWV3 396 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 SPTSSAQ969W0 71 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 STARD4Q96DR4 205 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF799Q96GE5 643 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 KCNS1Q96KK3 526 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 EMC6Q9BV81 110 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM59Q9BXS4 323 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 GNB1LQ9BYB4 327 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TMEM222Q9H0R3 208 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 METTL7AQ9H8H3 244 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 ST20Q9HBF5 79 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF586Q9NXT0 402 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TAAR3PQ9P1P4 343 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 GNG13Q9P2W3 67 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 GNG12Q9UBI6 72 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 ANXA10Q9UJ72 324 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TRAPPC1Q9Y5R8 145 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 LY96Q9Y6Y9 160 aa2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TET2Q6N021 2002 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P41-201ENST00000520234 TNRC6BQ9UPQ9 1833 aaKnown RBP2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CNTRLQ7Z7A1 2325 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 IGHV1-45A0A0A0MS14 117 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 A0A0J9YW62 118 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CTXND1A0A1B0GTU2 59 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 A0A1B0GV72 72 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PSMB11A5LHX3 300 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF716A6NP11 495 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CEBPZOSA8MTT3 80 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 H3BSH0 61 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 DEGS1O15121 323 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF861PO60384 105 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 SS18L1O75177 396 aaPredicted RBP2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 ZNF737O75373 536 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 NAPSAO96009 420 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 NRASP01111 189 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 KRASP01116 189 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CRISP2P16562 243 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TUBG1P23258 451 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CBLN1P23435 193 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CRYBB3P26998 211 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 OPRM1P35372 400 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 GABRA2P47869 451 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 CXCL12P48061 93 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 RAB9AP51151 201 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PCBD1P61457 104 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PPP1CBP62140 327 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 HSD52Q0P140 79 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 ARFRP1Q13795 201 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 VAMP3Q15836 100 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PMCHL1Q16048 86 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 SP6Q3SY56 376 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 PHYHD1Q5SRE7 291 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 TSPO2Q5TGU0 170 aa2.19□□□□□ -2.06
HMGB1P41-201ENST00000520234 FAM78BQ5VT40 261 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms