RNA–Protein interactions for RNA: ENST00000516409.1

SCARNA15.2-201, small Cajal body-specific RNA 15, humanhuman

BASIC

Gene SCARNA15, Length 127 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA15.2-201ENST00000516409 CCDC115Q96NT0 180 aa1.47□□□□□ -2.17
SCARNA15.2-201ENST00000516409 TRAPPC2LQ9UL33 140 aa1.47□□□□□ -2.17
SCARNA15.2-201ENST00000516409 HSPB11Q9Y547 144 aa1.47□□□□□ -2.17
SCARNA15.2-201ENST00000516409 DOCK4Q8N1I0 1966 aa1.47□□□□□ -2.17
SCARNA15.2-201ENST00000516409 CEP164Q9UPV0 1460 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 GABARAPH6UMI1 98 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ZNF705BP0CI00 300 aaPredicted RBP1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 BCL2P10415 239 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 GPX2P18283 190 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 POLR2HP52434 150 aaKnown RBP1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 MYL5Q02045 173 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ELOBQ15370 118 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 PRR15Q8IV56 129 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 C12orf29Q8N999 325 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TMEM35BQ8NCS4 154 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR9Q1Q8NGQ5 310 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR4K15Q8NH41 348 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ISOC1Q96CN7 298 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 C6orf62Q9GZU0 229 aaPredicted RBP1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 NAT8BQ9UHF3 227 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 HS3ST2Q9Y278 367 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 LAMTOR2Q9Y2Q5 125 aa1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ARHGEF28Q8N1W1 1705 aaKnown RBP1.46□□□□□ -2.18
SCARNA15.2-201ENST00000516409 NUMA1Q14980 2115 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 DENND4CQ5VZ89 1909 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CST7O76096 145 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 UBL3O95164 117 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 BAALC-AS2P0C853 105 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 RPS3P23396 243 aaKnown RBP eCLIP1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 HBBP68871 147 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 DEFB113Q30KQ7 82 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 KRTAP6-3Q3LI67 103 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 PATE2Q6UY27 113 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 Q6ZRN7 208 aaPredicted RBP1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 FP248Q71RG6 208 aaPredicted RBP1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 COA5Q86WW8 74 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 LINC00311Q8N616 119 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 LINC00301Q8NCQ3 95 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR2T35Q8NGX2 323 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ZCCHC13Q8WW36 166 aaKnown RBP1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 Q96M85 177 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 AIF1LQ9BQI0 150 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TMEM106BQ9NUM4 274 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CD109Q6YHK3 1445 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 GLI3P10071 1580 aa1.45□□□□□ -2.18
SCARNA15.2-201ENST00000516409 MYH7BA7E2Y1 1941 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 SMARCA4P51532 1647 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OBSL1O75147 1896 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ICE1Q9Y2F5 2266 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 A8MWV9 139 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 B4DSR2 109 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 LYZL6O75951 148 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 PROSCO94903 275 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 FABP2P12104 132 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 MIFP14174 115 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 AKR1C3P42330 323 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 DEFB103AP81534 67 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 EIF3IQ13347 325 aaKnown RBP1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 KRTAP13-4Q3LI77 160 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ZNF625Q96I27 306 aaPredicted RBP1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR2H1Q9GZK4 316 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CACYBPQ9HB71 228 aaKnown RBP1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 MED31Q9Y3C7 131 aa1.44□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CAMSAP2Q08AD1 1489 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 SCN8AQ9UQD0 1980 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 COL5A1P20908 1838 aaPredicted RBP1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ZFHX2Q9C0A1 2572 aaPredicted RBP1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 MEIKINA0A087WXM9 373 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TRAV14DV4A0A0A6YYC5 116 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 C2orf70A6NJV1 201 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OVOL1O14753 267 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 RER1O15258 196 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ARPC5O15511 151 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 HIST1H2BKO60814 126 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 FAM107AO95990 144 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 HIST1H2BJP06899 126 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 GPX1P07203 203 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 SCGB1A1P11684 91 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 KRTAP12-1P59990 96 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 PHF5AQ7RTV0 110 aaKnown RBP1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CHCHD1Q96BP2 118 aaKnown RBP1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 RETNLBQ9BQ08 111 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 DISP1Q96F81 1524 aa1.43□□□□□ -2.18
SCARNA15.2-201ENST00000516409 BCL9O00512 1426 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 A0A087WX48 190 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TRAV5A0A0B4J249 113 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ARL5CA6NH57 179 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 IFNA4P05014 189 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 SDC2P34741 201 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 RPL35P42766 123 aaKnown RBP1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 ROMO1P60602 79 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 KLRD1Q13241 179 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 CLECL1Q8IZS7 167 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TEX29Q8N6K0 151 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 OR5D16Q8NGK9 328 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 POP5Q969H6 163 aaKnown RBP1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 LINC00467Q9BRT7 94 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 TAF9BQ9HBM6 251 aa1.42□□□□□ -2.18
SCARNA15.2-201ENST00000516409 C14orf132Q9NPU4 83 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms