RNA–Protein interactions for RNA: ENST00000514987.5

NUP54-217, Transcript of nucleoporin 54, humanhuman

TSL 2 BASIC

Gene NUP54, Length 1,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-217ENST00000514987 ARPC1AQ92747 370 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 PLXNB1O43157 2135 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 WI2-2373I1.2A0A1W2PRP0 233 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 FAM231BA6NCW3 169 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 A8MWL6 223 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 H3BRN7 92 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 SPINK4O60575 86 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 EFNA4P52798 201 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 NUP35Q8NFH5 326 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 IGFBPL1Q8WX77 278 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 FAM168AQ92567 244 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 SAMD10Q9BYL1 202 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 GFRA4Q9GZZ7 299 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 PRO1933Q9H354 126 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 PRORYQ9H606 182 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 RPP21Q9H633 154 aaKnown RBP11.75□□□□□ -0.53
NUP54-217ENST00000514987 GNB4Q9HAV0 340 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 C1RLQ9NZP8 487 aa11.75□□□□□ -0.53
NUP54-217ENST00000514987 IGLV11-55A0A075B6I3 123 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 A0A1B0GUS0 222 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 K7EQM0 130 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 FRMD6-AS1P0C7T7 363 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 S100A7P31151 101 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 PRR27Q6MZM9 219 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 ZNF664Q8N3J9 261 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 SIGLECL1Q8N7X8 197 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 OR4B1Q8NGF8 309 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 DAZAP1Q96EP5 407 aaKnown RBP11.74□□□□□ -0.53
NUP54-217ENST00000514987 RNF125Q96EQ8 232 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 PRSS22Q9GZN4 317 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 ZNF586Q9NXT0 402 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 DMXL2Q8TDJ6 3036 aa11.74□□□□□ -0.53
NUP54-217ENST00000514987 A8MWP6 167 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 BMPR1BO00238 502 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 GNG7O60262 68 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 P01737 135 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 FAM106CPP0CH98 169 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 HOXB4P17483 251 aaPredicted RBP11.73□□□□□ -0.53
NUP54-217ENST00000514987 LINC00310P59036 64 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 SLC35B1P78383 322 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 LEMD1Q68G75 181 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 ZNF491Q8N8L2 437 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 SIRPDQ9H106 197 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 RPH3ALQ9UNE2 315 aa11.73□□□□□ -0.53
NUP54-217ENST00000514987 TRBV19A0A075B6N1 114 aa11.72□□□□□ -0.53
NUP54-217ENST00000514987 C19orf71A6NCJ1 209 aa11.72□□□□□ -0.53
NUP54-217ENST00000514987 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
NUP54-217ENST00000514987 ZNF253O75346 499 aa11.72□□□□□ -0.53
NUP54-217ENST00000514987 CA1P00915 261 aaPredicted RBP11.72□□□□□ -0.53
NUP54-217ENST00000514987 TMEM11P17152 192 aa11.72□□□□□ -0.53
NUP54-217ENST00000514987 LBHQ53QV2 105 aaPredicted RBP11.72□□□□□ -0.53
NUP54-217ENST00000514987 NEU1Q99519 415 aa11.72□□□□□ -0.53
NUP54-217ENST00000514987 TXN2Q99757 166 aa11.72□□□□□ -0.53
NUP54-217ENST00000514987 IGHV2-70DA0A0C4DH43 119 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 HIGD1CA8MV81 97 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 OR2J3O76001 311 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 GPX1P07203 203 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 IGLC2P0DOY2 106 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 SRIP30626 198 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 UBE2E1P51965 193 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 PDE6HQ13956 83 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 C1orf194Q5T5A4 169 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 Q86TA4 180 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 TMEM75Q8N9X5 138 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 C14orf144Q96I85 54 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 KCNS1Q96KK3 526 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 FANCD2OSQ96PS1 177 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 HSPB9Q9BQS6 159 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 NDUFAF3Q9BU61 184 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 UBTD1Q9HAC8 227 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 ZFP30Q9Y2G7 519 aa11.71□□□□□ -0.53
NUP54-217ENST00000514987 IL4P05112 153 aa11.71□□□□□ -0.54
NUP54-217ENST00000514987 SNRPCP09234 159 aaKnown RBP11.71□□□□□ -0.54
NUP54-217ENST00000514987 ZFP36P26651 326 aaKnown RBP11.71□□□□□ -0.54
NUP54-217ENST00000514987 Q6ZWC4 215 aa11.71□□□□□ -0.54
NUP54-217ENST00000514987 ARL6IP6Q8N6S5 226 aa11.71□□□□□ -0.54
NUP54-217ENST00000514987 FAM103A1Q9BTL3 118 aaKnown RBP11.71□□□□□ -0.54
NUP54-217ENST00000514987 LPAR2Q9HBW0 351 aa11.71□□□□□ -0.54
NUP54-217ENST00000514987 C21orf62Q9NYP8 219 aa11.71□□□□□ -0.54
NUP54-217ENST00000514987 LAMA5O15230 3695 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 SERTM2A0A1B0GWG4 89 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 A0A1B0GXF2 115 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 A0A1W2PRD5 423 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 A0A1W2PRF3 423 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 A0A1W2PRM7 423 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 ZNF705FA8MVS1 300 aaPredicted RBP11.7□□□□□ -0.54
NUP54-217ENST00000514987 NPIPB6E9PJ23 425 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 TOX4O94842 621 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 HLA-DRB1P01911 266 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 ZNF705DP0CH99 300 aaPredicted RBP11.7□□□□□ -0.54
NUP54-217ENST00000514987 ZNF705BP0CI00 300 aaPredicted RBP11.7□□□□□ -0.54
NUP54-217ENST00000514987 CD24P25063 80 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 CDKN1AP38936 164 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 KLF5Q13887 457 aaPredicted RBP11.7□□□□□ -0.54
NUP54-217ENST00000514987 KIAA1644Q3SXP7 199 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 ASPHD1Q5U4P2 390 aa11.7□□□□□ -0.54
NUP54-217ENST00000514987 ITLN2Q8WWU7 325 aaPredicted RBP11.7□□□□□ -0.54
NUP54-217ENST00000514987 SPTA1P02549 2419 aa11.69□□□□□ -0.54
NUP54-217ENST00000514987 FCGR2BP31994 310 aaPredicted RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms