RNA–Protein interactions for RNA: ENST00000514402.1

MATR3-223, Transcript of matrin 3, humanhuman

TSL 2

Gene MATR3, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MATR3-223ENST00000514402 SMIM3Q9BZL3 60 aa1.58□□□□□ -2.16
MATR3-223ENST00000514402 EPDR1Q9UM22 224 aa1.58□□□□□ -2.16
MATR3-223ENST00000514402 HHLA3Q9XRX5 114 aa1.58□□□□□ -2.16
MATR3-223ENST00000514402 TAF1LQ8IZX4 1826 aa1.58□□□□□ -2.16
MATR3-223ENST00000514402 CCDC171Q6TFL3 1326 aa1.58□□□□□ -2.16
MATR3-223ENST00000514402 NYNRINQ9P2P1 1898 aaKnown RBP1.58□□□□□ -2.16
MATR3-223ENST00000514402 MED23Q9ULK4 1368 aa1.58□□□□□ -2.16
MATR3-223ENST00000514402 TRAPPC8Q9Y2L5 1435 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 VIRMAQ69YN4 1812 aaKnown RBP1.57□□□□□ -2.16
MATR3-223ENST00000514402 CCDC88AQ3V6T2 1871 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 TRGV10A0A0A0MS01 117 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 A0A1B0GV90 55 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 DPM2O94777 84 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 TCL1BO95988 128 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 MT-ND4LP03901 98 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 CLPSP04118 112 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 SCTP09683 121 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 P0DMU3 169 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 FAM231AP0DMU4 169 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 FAM231CP0DMU5 169 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 NFYAP23511 347 aaPredicted RBP1.57□□□□□ -2.16
MATR3-223ENST00000514402 DYNLT1P63172 113 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 HBBP68871 147 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 HIST1H1AQ02539 215 aaPredicted RBP1.57□□□□□ -2.16
MATR3-223ENST00000514402 RELAQ04206 551 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 DEFB134Q4QY38 66 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 RPL13AP3Q6NVV1 102 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 DPPA3Q6W0C5 159 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 OR51A4Q8NGJ6 313 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 AQP3Q92482 292 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 PRADC1Q9BSG0 188 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 PAIP2BQ9ULR5 123 aaKnown RBP1.57□□□□□ -2.16
MATR3-223ENST00000514402 U3KQ87 197 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 MYH7BA7E2Y1 1941 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 RIMBP3CA6NJZ7 1639 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 RIMBP3BA6NNM3 1639 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 RIMBP3Q9UFD9 1639 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 MYH11P35749 1972 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 N4BP2Q86UW6 1770 aaPredicted RBP1.57□□□□□ -2.16
MATR3-223ENST00000514402 RIC1Q4ADV7 1423 aa1.57□□□□□ -2.16
MATR3-223ENST00000514402 SLX4Q8IY92 1834 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 A2MP01023 1474 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 NUP210Q8TEM1 1887 aaPredicted RBP1.56□□□□□ -2.16
MATR3-223ENST00000514402 PIK3C2AO00443 1686 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 IGHV1-18A0A0C4DH31 117 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 IGHV1-58A0A0C4DH39 117 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 TRBV10-2A0A0K0K1G8 114 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 A0A1W2PNM2 257 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 CCDC160A6NGH7 325 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 LINC00587B1AMM8 73 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 LY6LH3BQJ8 138 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 K7EP13 123 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 HIST1H2BKO60814 126 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 HIST1H2BJP06899 126 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 HTR1AP08908 422 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 CSRP1P21291 193 aaKnown RBP1.56□□□□□ -2.16
MATR3-223ENST00000514402 RPL35P42766 123 aaKnown RBP1.56□□□□□ -2.16
MATR3-223ENST00000514402 RAB5CP51148 216 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 NDUFA6P56556 154 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 LINC00305Q7Z4B0 112 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 C3orf56Q8N813 242 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 SLC30A7Q8NEW0 376 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 BRK1Q8WUW1 75 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 ZNF714Q96N38 554 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 AP1S3Q96PC3 154 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 CGREF1Q99674 301 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 LXNQ9BS40 222 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 KRTAP4-1Q9BYQ7 146 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 TCEAL2Q9H3H9 227 aaPredicted RBP1.56□□□□□ -2.16
MATR3-223ENST00000514402 CBLN4Q9NTU7 201 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 BAIAP2Q9UQB8 552 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 ANKRD31Q8N7Z5 1873 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 PTPRSQ13332 1948 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 MYH10P35580 1976 aa1.56□□□□□ -2.16
MATR3-223ENST00000514402 ARHGEF28Q8N1W1 1705 aaKnown RBP1.55□□□□□ -2.16
MATR3-223ENST00000514402 OBSL1O75147 1896 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 IGLV3-9A0A075B6K5 115 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 A0A096LPI6 279 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 A0A0D9SG52 128 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 TRBV7-6A0A0J9YX20 115 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 C7orf71A4D174 169 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 G3V3Q6 166 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 TIMM17BO60830 172 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 SULT1C4O75897 302 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 PAEPP09466 180 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 COX6A1P12074 109 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 HLA-EP13747 358 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 FXYD2P54710 66 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 DNAJB13P59910 316 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 KRTAP13-4Q3LI77 160 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 PABPC1L2AQ5JQF8 200 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 EIF5AL1Q6IS14 154 aaKnown RBP1.55□□□□□ -2.16
MATR3-223ENST00000514402 LCN15Q6UWW0 184 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 PHF5AQ7RTV0 110 aaKnown RBP1.55□□□□□ -2.16
MATR3-223ENST00000514402 OR4E2Q8NGC2 313 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 LPAR5Q9H1C0 372 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 TAF9BQ9HBM6 251 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 HS3ST2Q9Y278 367 aa1.55□□□□□ -2.16
MATR3-223ENST00000514402 SCAF11Q99590 1463 aaKnown RBP1.55□□□□□ -2.16
MATR3-223ENST00000514402 GREB1Q4ZG55 1949 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms