RNA–Protein interactions for RNA: ENST00000514093.5

SQSTM1-215, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 842 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-215ENST00000514093 BAP18Q8IXM2 172 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 OR13C8Q8NGS7 320 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 Q9H3A6 140 aa14.1□□□□□ -0.15
SQSTM1-215ENST00000514093 IGKV1D-37A0A075B6S9 117 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 CDS2O95674 445 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 XGP55808 180 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 OR2F1Q13607 317 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 NMSQ5H8A3 153 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 TTC32Q5I0X7 151 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 Q5VSD8 79 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 SELENOHQ8IZQ5 122 aaKnown RBP14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 ARRDC1Q8N5I2 433 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 OR11H7Q8NGC8 314 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 OR4D10Q8NGI6 311 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 ZFAND1Q8TCF1 268 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 GLYATL2Q8WU03 294 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 TMEM222Q9H0R3 208 aa14.09□□□□□ -0.15
SQSTM1-215ENST00000514093 TRAV12-2A0A075B6T6 113 aa14.08□□□□□ -0.16
SQSTM1-215ENST00000514093 CNN1P51911 297 aaKnown RBP14.08□□□□□ -0.16
SQSTM1-215ENST00000514093 IGFL4Q6B9Z1 124 aa14.08□□□□□ -0.16
SQSTM1-215ENST00000514093 MARCH1Q8TCQ1 289 aa14.08□□□□□ -0.16
SQSTM1-215ENST00000514093 C17orf77Q96MU5 243 aa14.08□□□□□ -0.16
SQSTM1-215ENST00000514093 ZNF586Q9NXT0 402 aa14.08□□□□□ -0.16
SQSTM1-215ENST00000514093 APOA1P02647 267 aa14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 HTN1P15515 57 aa14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 TSPOP30536 169 aa14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 OR5I1Q13606 314 aa14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 SCGB2B2Q4G0G5 96 aa14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 NOXA1Q86UR1 476 aa14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 RBPMSQ93062 196 aaKnown RBP14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 RSG1Q9BU20 258 aa14.07□□□□□ -0.16
SQSTM1-215ENST00000514093 VPS13BQ7Z7G8 4022 aa14.06□□□□□ -0.16
SQSTM1-215ENST00000514093 TEX13DA0A0J9YY54 714 aaPredicted RBP14.06□□□□□ -0.16
SQSTM1-215ENST00000514093 GAMTQ14353 236 aa14.06□□□□□ -0.16
SQSTM1-215ENST00000514093 TMEM268Q5VZI3 342 aa14.06□□□□□ -0.16
SQSTM1-215ENST00000514093 TERB2Q8NHR7 220 aa14.06□□□□□ -0.16
SQSTM1-215ENST00000514093 LINC01587Q99440 93 aa14.06□□□□□ -0.16
SQSTM1-215ENST00000514093 TRAV26-1A0A087WT03 109 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 A0A0J9YY99 117 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 SNRPGP15A8MWD9 76 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 HPGDSO60760 199 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 B3GALNT1O75752 331 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 ESRGQ1W209 222 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 GNPNAT1Q96EK6 184 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 SLC25A39Q9BZJ4 359 aaPredicted RBP14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 SLC25A32Q9H2D1 315 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 SLC25A22Q9H936 323 aa14.05□□□□□ -0.16
SQSTM1-215ENST00000514093 DUSP14O95147 198 aaKnown RBP14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 MEOX2P50222 304 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 B2MP61769 119 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 GPR141Q7Z602 305 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 LGI3Q8N145 548 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 RNF182Q8N6D2 247 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 OR52I2Q8NH67 350 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 FRZBQ92765 325 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 NAA60Q9H7X0 242 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 U3KQ87 197 aa14.04□□□□□ -0.16
SQSTM1-215ENST00000514093 FLG2Q5D862 2391 aaPredicted RBP14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 TNFAIP8O95379 198 aa14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 GALR1P47211 349 aa14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 SAMD13Q5VXD3 122 aa14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 SLC35E1Q96K37 410 aa14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 RTBDNQ9BSG5 229 aaPredicted RBP14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 NOP10Q9NPE3 64 aaKnown RBP14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 MDFICQ9P1T7 246 aa14.03□□□□□ -0.16
SQSTM1-215ENST00000514093 A0A1W2PPQ1 181 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 GABARAPH6UMI1 98 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 GABARAPO95166 117 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 PRB4P10163 310 aaPredicted RBP14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 LINC00315P59091 139 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 DTD1Q8TEA8 209 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 UPK3BQ9BT76 320 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 RBKSQ9H477 322 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 PRR13Q9NZ81 148 aa14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 TIMM8BQ9Y5J9 83 aaPredicted RBP14.02□□□□□ -0.17
SQSTM1-215ENST00000514093 TRAV8-2A0A0B4J237 113 aa14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 SMR3BP02814 79 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 FABP1P07148 127 aa14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 SULT1A3P0DMM9 295 aa14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 SULT1A4P0DMN0 295 aa14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 GPX4P36969 197 aaPredicted RBP14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 RXFP4Q8TDU9 374 aa14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 PGPEP1Q9NXJ5 209 aa14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 C14orf166Q9Y224 244 aaKnown RBP14.01□□□□□ -0.17
SQSTM1-215ENST00000514093 ZNF98A6NK75 572 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 BOLA2-SMG1P6H3BVE0 249 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 RAB3DO95716 219 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 ZNF182P17025 639 aaPredicted RBP14□□□□□ -0.17
SQSTM1-215ENST00000514093 M6PRP20645 277 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 TAS2R60P59551 318 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 FGL1Q08830 312 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 FAAP20Q6NZ36 180 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 Q6ZRN7 208 aaPredicted RBP14□□□□□ -0.17
SQSTM1-215ENST00000514093 YIPF6Q96EC8 236 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 PTTG2Q9NZH5 202 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 MTFP1Q9UDX5 166 aa14□□□□□ -0.17
SQSTM1-215ENST00000514093 MRPS16Q9Y3D3 137 aaKnown RBP14□□□□□ -0.17
SQSTM1-215ENST00000514093 IGKV1OR2-108A0A075B7D4 117 aa13.99□□□□□ -0.17
SQSTM1-215ENST00000514093 FAM25AB3EWG3 89 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 104.3 ms