RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 GNG10P50151 68 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 ZNF345Q14585 488 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 FAM173BQ6P4H8 233 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 Q6ZRN7 208 aaPredicted RBP2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 IMUPQ9GZP8 106 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 BOLA2Q9H3K6 86 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 KNDC1Q76NI1 1749 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 FMN2Q9NZ56 1722 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 IFT172Q9UG01 1749 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 MARF1Q9Y4F3 1742 aaKnown RBP2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 ATP7BP35670 1465 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 CD163L1Q9NR16 1453 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 PLXND1Q9Y4D7 1925 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 CPSF1Q10570 1443 aaKnown RBP2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 RIC1Q4ADV7 1423 aa2.24□□□□□ -2.05
HMGB1P47-201ENST00000511281 DOCK10Q96BY6 2186 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 ABCA3Q99758 1704 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 KIF1AQ12756 1690 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 PLCH1Q4KWH8 1693 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 ATG12O94817 140 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 RPSAP08865 295 aaKnown RBP2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 SPI1P17947 270 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 SRIP30626 198 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 ATP5G3P48201 142 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 PIGPP57054 158 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 VBP1P61758 197 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 TMEM155Q4W5P6 130 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 LCN15Q6UWW0 184 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 C10orf126Q8N4M7 172 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 ADAT3Q96EY9 351 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 OSTCQ9NRP0 149 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 PRNDQ9UKY0 176 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 PPIP5K1Q6PFW1 1433 aa2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 RGPD8O14715 1765 aaPredicted RBP2.23□□□□□ -2.05
HMGB1P47-201ENST00000511281 NRAPQ86VF7 1730 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 CCDC88CQ9P219 2028 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 F8W036 122 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 SDCBPO00560 298 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 CTSDP07339 412 aaPredicted RBP2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 KRTAP12-1P59990 96 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 NNATQ16517 81 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 ARHGAP11BQ3KRB8 267 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 LYRM7Q5U5X0 104 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 Q6ZQT0 140 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 ZNF826PQ6ZT77 177 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 ZNF439Q8NDP4 499 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 DNAJC9Q8WXX5 260 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 SH3BGRL3Q9H299 93 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 EPDR1Q9UM22 224 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 ANKARQ7Z5J8 1434 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 ADGRB2O60241 1585 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 ARHGEF10O15013 1369 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 ALS2Q96Q42 1657 aa2.22□□□□□ -2.05
HMGB1P47-201ENST00000511281 LRP5O75197 1615 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 A0A087X0T9 212 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 IGKV1-9A0A0C4DH69 117 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 OVOS2A0A0J9YW53 1432 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 HMGB3O15347 200 aaKnown RBP2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 IFNA7P01567 189 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 PMP2P02689 132 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 KRTAP12-3P60328 96 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 RRN3P1Q2M238 152 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 OVOS2Q6IE36 1432 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 C7orf65Q6ZTY9 151 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 OR5A1Q8NGJ0 315 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 GINS4Q9BRT9 223 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 GINS3Q9BRX5 216 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 YIPF3Q9GZM5 350 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 NWD2Q9ULI1 1742 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 CRYBG1Q9Y4K1 1723 aa2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 AMMECR1Q9Y4X0 333 aaPredicted RBP2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 COL14A1Q05707 1796 aaKnown RBP2.21□□□□□ -2.06
HMGB1P47-201ENST00000511281 PHRF1Q9P1Y6 1649 aaKnown RBP2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 GBF1Q92538 1859 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 ARHGEF28Q8N1W1 1705 aaKnown RBP2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 TNS1Q9HBL0 1735 aaKnown RBP2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 NRKQ7Z2Y5 1582 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 DISP2A7MBM2 1401 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 TMEM212A6NML5 194 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 CLDN25C9JDP6 229 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 ORC5O43913 435 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 SHBGP04278 402 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 OR4E1P0C645 316 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 NCALDP61601 193 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 GNG3P63215 75 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 Q1T7F1 81 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 DPPA3Q6W0C5 159 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 OR4D11Q8NGI4 311 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 WFDC5Q8TCV5 224 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 FAM172AQ8WUF8 416 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 MBD3L1Q8WWY6 194 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 SLAMF6Q96DU3 332 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 LYRM2Q9NU23 88 aaPredicted RBP2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 RGPD1P0DJD0 1748 aa2.2□□□□□ -2.06
HMGB1P47-201ENST00000511281 BRWD1Q9NSI6 2320 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 TOPAZ1Q8N9V7 1692 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 LMO7Q8WWI1 1683 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 AIPO00170 330 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 CYB5BO43169 146 aa2.19□□□□□ -2.06
HMGB1P47-201ENST00000511281 IFI30P13284 250 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms