RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PVRIGQ6DKI7 326 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 C8orf46Q8TAG6 207 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 CLEC7AQ9BXN2 247 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 FBXL7Q9UJT9 491 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 SOX21Q9Y651 276 aaPredicted RBP8.81□□□□□ -1
SH3RF1-203ENST00000508685 MED13LQ71F56 2210 aa8.81□□□□□ -1
SH3RF1-203ENST00000508685 A6NNC1 897 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 E7EUB6 86 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 BUB1B-PAK6H3BSN5 160 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 CORTO00230 105 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 IGLV2-23P01705 113 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 LIPFP07098 398 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 ARF6P62330 175 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 MRPL54Q6P161 138 aaKnown RBP8.8□□□□□ -1
SH3RF1-203ENST00000508685 TEX45Q8NA69 505 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 LY6G5BQ8NDX9 201 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 TSKUQ8WUA8 353 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 NPIPB3Q92617 1050 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 TNFRSF14Q92956 283 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 TRGV9Q99603 122 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 SSBP3Q9BWW4 388 aaPredicted RBP8.8□□□□□ -1
SH3RF1-203ENST00000508685 TPSG1Q9NRR2 321 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 UQCR10Q9UDW1 63 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 PAM16Q9Y3D7 125 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 KLF12Q9Y4X4 402 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 C20orf202A1L168 122 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 OR2J3O76001 311 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 CRYGCP07315 174 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 FRMD6-AS1P0C7T7 363 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 MYCNOSP40205 109 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 TCL1AP56279 114 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 UBE2G1P62253 170 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 WT1-ASQ06250 92 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 CT83Q5H943 113 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 C10orf55Q5SWW7 151 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 FXYD5Q96DB9 178 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 TMEM68Q96MH6 324 aa8.8□□□□□ -1
SH3RF1-203ENST00000508685 FAM103A1Q9BTL3 118 aaKnown RBP8.8□□□□□ -1
SH3RF1-203ENST00000508685 TRAV5A0A0B4J249 113 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 F2Z2F3 143 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 ENSAO43768 121 aaKnown RBP8.79□□□□□ -1
SH3RF1-203ENST00000508685 SLC25A17O43808 307 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 SPINK4O60575 86 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 RBP4P02753 201 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 LDLRAD2Q5SZI1 272 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 PATE2Q6UY27 113 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 Q8N976 141 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 NUDT11Q96G61 164 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 PSMG3-AS1Q96PY0 264 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 EPDR1Q9UM22 224 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 PLXNB1O43157 2135 aa8.79□□□□□ -1
SH3RF1-203ENST00000508685 IGKV1D-37A0A075B6S9 117 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 IGHV1-3A0A0C4DH29 117 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 CD33P20138 364 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 CNTFRP26992 372 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 CTRLP40313 264 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 GPR6P46095 362 aaPredicted RBP8.78□□□□□ -1
SH3RF1-203ENST00000508685 MFAP2P55001 183 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 COL5A1-AS1Q5SY13 56 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 DMRTA1Q5VZB9 504 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 LINC00305Q7Z4B0 112 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 NUP35Q8NFH5 326 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 C18orf32Q8TCD1 76 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 IGFBPL1Q8WX77 278 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 GPR82Q96P67 336 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 ATG101Q9BSB4 218 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 FNDC4Q9H6D8 234 aaPredicted RBP8.78□□□□□ -1
SH3RF1-203ENST00000508685 TNFRSF19Q9NS68 423 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 SPG11Q96JI7 2443 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 SETXQ7Z333 2677 aaKnown RBP8.78□□□□□ -1
SH3RF1-203ENST00000508685 LOC105371242A0A075B767 164 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 FAM231BA6NCW3 169 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 CGB1A6NKQ9 187 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 ZNF25P17030 456 aaPredicted RBP8.78□□□□□ -1
SH3RF1-203ENST00000508685 PMCHP20382 165 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 ZFP36P26651 326 aaKnown RBP8.78□□□□□ -1
SH3RF1-203ENST00000508685 PLP1P60201 277 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 SLC35B1P78383 322 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 KLRD1Q13241 179 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 KIAA1644Q3SXP7 199 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 TDRG1Q3Y452 100 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 FMC1Q96HJ9 113 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 GFRA4Q9GZZ7 299 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 ZNF492Q9P255 531 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 INSIG2Q9Y5U4 225 aa8.78□□□□□ -1
SH3RF1-203ENST00000508685 A8MWL6 223 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 HYPMO75409 117 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 HSBP1O75506 76 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 PYYP10082 97 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 MRGPRG-AS1Q2M3A8 158 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 SPATA45Q537H7 98 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 MORN5Q5VZ52 161 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 NIT1Q86X76 327 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 C5orf17Q8NAS9 161 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 TMEM116Q8NCL8 245 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 RPEQ96AT9 228 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 WNK2Q9Y3S1 2297 aa8.77□□□□□ -1.01
SH3RF1-203ENST00000508685 A1L4Q6 167 aa8.76□□□□□ -1.01
SH3RF1-203ENST00000508685 DLEU1O43261 78 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms