RNA–Protein interactions for RNA: ENST00000508474.5

UBE2D3-224, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 4,819 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-224ENST00000508474 CD28P10747 220 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 RNASE4P34096 147 aaKnown RBP6□□□□□ -1.45
UBE2D3-224ENST00000508474 FAM104BQ5XKR9 115 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 RNF144BQ7Z419 303 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 HAPLN4Q86UW8 402 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 ABHD17AQ96GS6 310 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 DPH3P1Q9H4G8 78 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 TNKS1BP1Q9C0C2 1729 aaKnown RBP6□□□□□ -1.45
UBE2D3-224ENST00000508474 TRAV40A0A0B4J280 105 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 MYMXA0A1B0GTQ4 84 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 NPIPB5A8MRT5 1133 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 PRSS46E5RG02 174 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 GAGE2AQ6NT46 116 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 CENPVQ7Z7K6 275 aaPredicted RBP6□□□□□ -1.45
UBE2D3-224ENST00000508474 AMN1Q8IY45 258 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 FAM216BQ8N7L0 139 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 TMEM75Q8N9X5 138 aa6□□□□□ -1.45
UBE2D3-224ENST00000508474 VCYO14598 125 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 RFPL3SP0C7P2 107 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 HIST1H4AP62805 103 aaKnown RBP5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 PMVKQ15126 192 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 Q6P435 159 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 SLC25A45Q8N413 288 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 SS18L2Q9UHA2 77 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 NBR2O15453 112 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 Q8N8P6 123 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 ZIC4Q8N9L1 334 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 NPFFR1Q9GZQ6 430 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 KIF26BQ2KJY2 2108 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 B5MCH6 92 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 SLC25A20O43772 301 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 EXOC3-AS1Q8N2X6 119 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 CYYR1Q96J86 154 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 NRXN2Q9P2S2 1712 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 A0A1W2PR77 199 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 PMS2P5A8MQ11 134 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 H3BMG7 143 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 IGKV1D-33P01593 117 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 IGKV1-33P01594 117 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 ARMS2P0C7Q2 107 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 PDE6HQ13956 83 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 DNAJC30Q96LL9 226 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 IMMP1LQ96LU5 166 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 RCHY1Q96PM5 261 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 TMEM126AQ9H061 195 aa5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 RPUSD1Q9UJJ7 312 aaKnown RBP5.99□□□□□ -1.45
UBE2D3-224ENST00000508474 SHANK3Q9BYB0 1731 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 LCTP09848 1927 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 G3V4G9 280 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 LINC00473A8K010 186 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 B9A039 149 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 IGLC1P0CG04 106 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 FXYD7P58549 80 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 C1orf122Q6ZSJ8 110 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 ZNF114Q8NC26 417 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 RNF5Q99942 180 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 MBNL3Q9NUK0 354 aaKnown RBP5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 HEATR5BQ9P2D3 2071 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 LOC102723996A0A087X1L8 192 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 TRAV8-3A0A0A6YYJ7 113 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 TEX48A0A1B0GUV7 120 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 EFNA2O43921 213 aa5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 RNASE2P10153 161 aaKnown RBP5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 PPIFP30405 207 aaKnown RBP5.98□□□□□ -1.45
UBE2D3-224ENST00000508474 TRAV3A0A0B4J244 114 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 KLK10O43240 276 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 CRPP02741 224 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 CELA3AP09093 270 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 C12orf74Q32Q52 190 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 CDCP2Q5VXM1 449 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 SIGLEC8Q9NYZ4 499 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 IGHV3-35A0A0C4DH35 117 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 SRRM5B3KS81 715 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 TRGV3P03979 118 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 CLPSP04118 112 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 CSRP1P21291 193 aaKnown RBP5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 HLA-DMBP28068 263 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 MRPL14Q6P1L8 145 aaKnown RBP5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 TMEM141Q96I45 108 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 TP53BP1Q12888 1972 aaPredicted RBP5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 TRGV11A0A075B6L2 103 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 CD7P09564 240 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 IGHV1-2P23083 117 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 DUX5Q96PT3 197 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 TMEM133Q9H2Q1 129 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 PRO1854Q9UHT4 67 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 LSM4Q9Y4Z0 139 aaKnown RBP5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 IGKV2-40A0A087WW87 121 aaPredicted RBP5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 IGKV2D-40P01614 121 aaPredicted RBP5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 IGHV3-23P01764 117 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 TMEM86BQ8N661 226 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 FGFBP3Q8TAT2 258 aa5.97□□□□□ -1.45
UBE2D3-224ENST00000508474 IGHV3OR16-13A0A075B7E8 117 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 IGHV3-74A0A0B4J1X5 117 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 IGKV1-6A0A0C4DH72 117 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 SHISA9B4DS77 424 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 TAX1BP3O14907 124 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 PSPNO60542 156 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 IGHG4P01861 327 aa5.96□□□□□ -1.45
UBE2D3-224ENST00000508474 Q6ZVH6 145 aa5.96□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms