RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 NMES1Q9C002 83 aa13.14□□□□□ -0.31
SMN1-204ENST00000506163 LYRM2Q9NU23 88 aaPredicted RBP13.14□□□□□ -0.31
SMN1-204ENST00000506163 ORM2P19652 201 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 AP2S1P53680 142 aaPredicted RBP13.13□□□□□ -0.31
SMN1-204ENST00000506163 SLC38A11Q08AI6 406 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 TMEM217Q8N7C4 229 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 OR1B1Q8NGR6 318 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 OVOL2Q9BRP0 275 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 GGACTQ9BVM4 153 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 EDA2RQ9HAV5 297 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 OR5AC2Q9NZP5 309 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 MGAT4CQ9UBM8 478 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 CFDP00746 253 aaPredicted RBP13.13□□□□□ -0.31
SMN1-204ENST00000506163 C1orf194Q5T5A4 169 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 TEPPQ6URK8 271 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 MGST2Q99735 147 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 NRN1Q9NPD7 142 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 DOK5Q9P104 306 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 SLC45A2Q9UMX9 530 aa13.13□□□□□ -0.31
SMN1-204ENST00000506163 ZNF98A6NK75 572 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 SSNA1O43805 119 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 PTTG1O95997 202 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 PVALBP20472 110 aaPredicted RBP13.12□□□□□ -0.31
SMN1-204ENST00000506163 SULT1A1P50225 295 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 PLP1P60201 277 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 LRRC37A5PQ49AS3 106 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 PATE2Q6UY27 113 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 RNF126Q9BV68 326 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 ALG5Q9Y673 324 aa13.12□□□□□ -0.31
SMN1-204ENST00000506163 KIR2DL5BA0A0G2JN68 375 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 KIR2DL5BA0A0G2JPC4 375 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 KNCNA6PVL3 124 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 SOCS3O14543 225 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 AGPAT2O15120 278 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 LINC00869P0C866 280 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 VWC2Q2TAL6 325 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 KIR2DL5AQ8N109 375 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 KIR2DL5BQ8NHK3 375 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 PPP1R14BQ96C90 147 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 SCRT1Q9BWW7 348 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 SLC25A32Q9H2D1 315 aa13.11□□□□□ -0.31
SMN1-204ENST00000506163 NUP62P37198 522 aaPredicted RBP13.1□□□□□ -0.31
SMN1-204ENST00000506163 APOC4P55056 127 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 SELENOTP62341 195 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 NHLH2Q02577 135 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 PSMG4Q5JS54 123 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 OR8I2Q8N0Y5 310 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 PPP1R1CQ8WVI7 109 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 UHRF2Q96PU4 802 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 TMEM147Q9BVK8 224 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 SLC25A39Q9BZJ4 359 aaPredicted RBP13.1□□□□□ -0.31
SMN1-204ENST00000506163 SLC25A22Q9H936 323 aa13.1□□□□□ -0.31
SMN1-204ENST00000506163 H3BRN7 92 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 HYPMO75409 117 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 CXCL3P19876 107 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 DEFB1P60022 68 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 CYCSP99999 105 aaKnown RBP13.09□□□□□ -0.31
SMN1-204ENST00000506163 DEFB135Q30KP9 77 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 Q6ZWC4 215 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 SHANK2-AS3Q9BTD1 123 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 ARL6Q9H0F7 186 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 CSTL1Q9H114 145 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 PFDN2Q9UHV9 154 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 WDR83OSQ9Y284 106 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 CSMD3Q7Z407 3707 aa13.09□□□□□ -0.31
SMN1-204ENST00000506163 GIG44P09565 113 aaPredicted RBP13.08□□□□□ -0.32
SMN1-204ENST00000506163 UQCC1Q9NVA1 299 aa13.08□□□□□ -0.32
SMN1-204ENST00000506163 FBXL17Q9UF56 701 aa13.08□□□□□ -0.32
SMN1-204ENST00000506163 HIGD1AQ9Y241 93 aa13.08□□□□□ -0.32
SMN1-204ENST00000506163 E5RGE8 158 aa13.07□□□□□ -0.32
SMN1-204ENST00000506163 UBE2CO00762 179 aa13.07□□□□□ -0.32
SMN1-204ENST00000506163 MPC2O95563 127 aa13.07□□□□□ -0.32
SMN1-204ENST00000506163 OR5G3P0C626 314 aa13.07□□□□□ -0.32
SMN1-204ENST00000506163 S100A11P31949 105 aa13.07□□□□□ -0.32
SMN1-204ENST00000506163 LCE2DQ5TA82 110 aaPredicted RBP13.07□□□□□ -0.32
SMN1-204ENST00000506163 TRPT1Q86TN4 253 aaKnown RBP13.07□□□□□ -0.32
SMN1-204ENST00000506163 RNF183Q96D59 192 aa13.07□□□□□ -0.32
SMN1-204ENST00000506163 RSG1Q9BU20 258 aa13.07□□□□□ -0.32
SMN1-204ENST00000506163 SEPSECSQ9HD40 501 aaKnown RBP13.07□□□□□ -0.32
SMN1-204ENST00000506163 UBE2L5PA0A1B0GUS4 154 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 SPRY2O43597 315 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 RLN2P04090 185 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 CAMLGP49069 296 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 EWSR1Q01844 656 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMN1-204ENST00000506163 ACTL10Q5JWF8 245 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 MIC13Q5XKP0 118 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 STX12Q86Y82 276 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 TMEM37Q8WXS4 190 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 C20orf173Q96LM9 149 aa13.06□□□□□ -0.32
SMN1-204ENST00000506163 RAP2BP61225 183 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 PRR20EP86478 221 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 PRR20CP86479 221 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 PRR20DP86480 221 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 PRR20BP86481 221 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 PRR20AP86496 221 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 GDF5OSQ5U4N7 250 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 MORN5Q5VZ52 161 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 ZNF546Q86UE3 836 aa13.05□□□□□ -0.32
SMN1-204ENST00000506163 OR11H7Q8NGC8 314 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms