RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 FNDC9Q8TBE3 224 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 DCUN1D1Q96GG9 259 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 DIRAS2Q96HU8 199 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 MGLLQ99685 303 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 MND1Q9BWT6 205 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 ZNF391Q9UJN7 358 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 NF1P21359 2839 aa2.71□□□□□ -1.98
HMGB1P3-201ENST00000502802 C2CD3Q4AC94 2353 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 UQCRHLA0A096LP55 91 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 A0A0J9YY10 115 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR6C6A6NF89 314 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 DISC1C4P0D8 188 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 SLC17A3O00476 420 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR1I1O60431 355 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR2B3O76000 313 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 LY6HO94772 140 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 APOMO95445 188 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 UQCRHP07919 91 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 P0C880 135 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 COL8A2P25067 703 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 HSD11B1P28845 292 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 SERPINB1P30740 379 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 SLCO1A2P46721 670 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 KRTAP10-8P60410 259 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 DCDP81605 110 aaKnown RBP2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 PRDX4Q13162 271 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR2F1Q13607 317 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 SPA17Q15506 151 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 AMTNQ6UX39 209 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 PPP1R2P1Q96PQ5 205 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 SLC2A9Q9NRM0 540 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 MRPL16Q9NX20 251 aaKnown RBP2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 SLC22A13Q9Y226 551 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 ZNF469Q96JG9 3925 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 EXPH5Q8NEV8 1989 aa2.7□□□□□ -1.98
HMGB1P3-201ENST00000502802 NAV3Q8IVL0 2385 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 HEATR5AQ86XA9 2040 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 A0A1W2PNM2 257 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 GNG14A0A1W2PPG7 69 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 C17orf98A8MV24 154 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 CRHBPP24387 322 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 CRYBB3P26998 211 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 LPAR6P43657 344 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 MAP2K4P45985 399 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 ZNF117Q03924 483 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 SMCO1Q147U7 214 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 CCSMST1Q4G0I0 132 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 FAM229BQ4G0N7 80 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 C5orf46Q6UWT4 87 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 IDO2Q6ZQW0 420 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 Q6ZS92 163 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 CLVS1Q8IUQ0 354 aaPredicted RBP2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 OR2T27Q8NH04 317 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 CAPZA3Q96KX2 299 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 PRRT1Q99946 306 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 CMTM6Q9NX76 183 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 ANAPC10Q9UM13 185 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 FAM32AQ9Y421 112 aaKnown RBP2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 MTORP42345 2549 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 ZANQ9Y493 2812 aa2.69□□□□□ -1.98
HMGB1P3-201ENST00000502802 MED12Q93074 2177 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 ABCA4P78363 2273 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 MED12LQ86YW9 2145 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 ACANP16112 2415 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 IGLV10-54A0A075B6I4 117 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 IGHV3-73A0A0B4J1V6 119 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 A0A1B0GX78 115 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 C19orf71A6NCJ1 209 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 CRYZL1O95825 349 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 CCL3P10147 92 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 CCL1P22362 96 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 RPL22P35268 128 aaKnown RBP2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 GNG10P50151 68 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 SULT1A1P50225 295 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 GUK1Q16774 197 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 WHAMMP3Q1A5X7 153 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 TMPPEQ6ZT21 453 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 ST6GALNAC3Q8NDV1 305 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 C1orf54Q8WWF1 131 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 PSMF1Q92530 271 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 C12orf43Q96C57 262 aaKnown RBP2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 CCL13Q99616 98 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 C16orf95Q9H693 158 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 ZNF337Q9Y3M9 751 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 NUBP2Q9Y5Y2 271 aa2.68□□□□□ -1.98
HMGB1P3-201ENST00000502802 KIAA1549Q9HCM3 1950 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 IGKV3D-11A0A0A0MRZ8 115 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 TGIF2-C20orf24A0A0A6YYL0 155 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 GRIFINA4D1Z8 144 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 TMEM114B3SHH9 223 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 G3V3Q6 166 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 H0YGG7 62 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 M0QZK8 103 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 UBE2L6O14933 153 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 KRT75O95678 551 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 APOC1P02654 83 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 CTSGP08311 255 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 COX6A1P12074 109 aa2.67□□□□□ -1.98
HMGB1P3-201ENST00000502802 RPS3P23396 243 aaKnown RBP eCLIP2.67□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms