RNA–Protein interactions for RNA: ENST00000502717.5

HMGXB3-201, Transcript of HMG-box containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HMGXB3, Length 4,974 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-201ENST00000502717 KIR2DL4Q99706 377 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 HOXA3O43365 443 aaPredicted RBP14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 PF4P02776 101 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 ZNF329Q86UD4 541 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 RPUSD1Q9UJJ7 312 aaKnown RBP14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 FAM231BA6NCW3 169 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 H3BRM9 83 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 PRSS2P07478 247 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 FAM231DQ6ZW35 169 aa14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 RNASE6Q93091 150 aaKnown RBP14.11□□□□□ -0.15
HMGXB3-201ENST00000502717 SHANK1Q9Y566 2161 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 Q8NFD4 153 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 GTSF1LQ9H1H1 148 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 TMEM262E9PQX1 116 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 TOMM40O96008 361 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 SLAQ13239 276 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 DOCK8Q8NF50 2099 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 CD177Q8N6Q3 437 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 NEU4Q8WWR8 484 aaPredicted RBP14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 LINC00479Q96M42 142 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 D6R8Y8 96 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 APOBEC3AP31941 199 aaPredicted RBP14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 ZNF138P52744 262 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 CYSLTR1Q9Y271 337 aa14.1□□□□□ -0.15
HMGXB3-201ENST00000502717 PF4V1P10720 104 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 PI4KAP42356 2102 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 SELENOKQ9Y6D0 94 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 IL18BPO95998 194 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 MAJINQ3KP22 176 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 PRR31Q5SQ13 230 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 METRNQ9UJH8 293 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 IGKV3-7A0A075B6H7 116 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 ID1P41134 155 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 CT83Q5H943 113 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 FAM168AQ92567 244 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 VDAC2P45880 294 aaPredicted RBP14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 TRGV9Q99603 122 aa14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 DIDO1Q9BTC0 2240 aaKnown RBP14.09□□□□□ -0.15
HMGXB3-201ENST00000502717 COL4A3Q01955 1670 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 CCL25O15444 150 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 FAM169BQ8N8A8 192 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 RNF125Q96EQ8 232 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 CKS1BP61024 79 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 ASCL2Q99929 193 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 NUPR1O60356 82 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 CCL3L1P16619 93 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 DENND4CQ5VZ89 1909 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 C9orf118A6NHY6 69 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 LMO1P25800 156 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 SRSF1Q07955 248 aaKnown RBP eCLIP14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 TMEM170BQ5T4T1 132 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 RCHY1Q96PM5 261 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 MCRIP2Q9BUT9 160 aaKnown RBP14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 C21orf62Q9NYP8 219 aa14.08□□□□□ -0.16
HMGXB3-201ENST00000502717 PAPPA-AS1Q5QFB9 102 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 ZNF492Q9P255 531 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 IGLC7A0M8Q6 106 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 F2Z2F3 143 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 RNASE2P10153 161 aaKnown RBP14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 FAM71F2Q6NXP2 309 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 Q6ZSR3 168 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 SYT8Q8NBV8 401 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 ANAPC13Q9BS18 74 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 TMEM167AQ8TBQ9 72 aa14.07□□□□□ -0.16
HMGXB3-201ENST00000502717 K7EP13 123 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 EMP1P54849 157 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 VKORC1Q9BQB6 163 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 MYOD1P15172 320 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 NPPCP23582 126 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 VWC2Q2TAL6 325 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 PPP1R27Q86WC6 154 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 BVES-AS1Q5T3Y7 98 aa14.06□□□□□ -0.16
HMGXB3-201ENST00000502717 IGHV2-70DA0A0C4DH43 119 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 GGTLC3B5MD39 225 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 TGFAP01135 160 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 WNT2P09544 360 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 NOTCH2Q04721 2471 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 COX8AP10176 69 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 TDRG1Q3Y452 100 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 KLF17Q5JT82 389 aaPredicted RBP14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 LOC105371242A0A075B767 164 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 K7EN84 100 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 LOXL3P58215 753 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 C10orf55Q5SWW7 151 aa14.05□□□□□ -0.16
HMGXB3-201ENST00000502717 PSG3Q16557 428 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 LYZL1Q6UWQ5 148 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 GTSCR1Q86UQ5 136 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 EXOC3-AS1Q8N2X6 119 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 TMEM14BQ9NUH8 114 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 BEX4Q9NWD9 120 aaPredicted RBP14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 ZNF106Q9H2Y7 1883 aaKnown RBP14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 A8MWV9 139 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 M0R381 172 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 C9orf106Q8NAJ2 232 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 CREBBPQ92793 2442 aa14.04□□□□□ -0.16
HMGXB3-201ENST00000502717 TRAV8-2A0A0B4J237 113 aa14.03□□□□□ -0.16
HMGXB3-201ENST00000502717 ADAMTSL5Q6ZMM2 481 aa14.03□□□□□ -0.16
HMGXB3-201ENST00000502717 SLC25A39Q9BZJ4 359 aaPredicted RBP14.03□□□□□ -0.16
HMGXB3-201ENST00000502717 IGHV1-18A0A0C4DH31 117 aa14.03□□□□□ -0.16
HMGXB3-201ENST00000502717 IGHV1-24A0A0C4DH33 117 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms