RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 UBR2Q8IWV8 1755 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 ARHGEF28Q8N1W1 1705 aaKnown RBP0.62□□□□□ -2.31
PSPC1-205ENST00000497722 IGLV3-32A0A0A0MS00 114 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 TMEM210A6NLX4 147 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 OR7C1O76099 320 aaPredicted RBP0.62□□□□□ -2.31
PSPC1-205ENST00000497722 IFNA7P01567 189 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 IFNA6P05013 189 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 SERPINB9P50453 376 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 EIF5AL1Q6IS14 154 aaKnown RBP0.62□□□□□ -2.31
PSPC1-205ENST00000497722 PDZD9Q8IXQ8 264 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 IFT20Q8IY31 132 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 PLPP5Q8NEB5 264 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 TMEM70Q9BUB7 260 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 TNRC6AQ8NDV7 1962 aaKnown RBP0.62□□□□□ -2.31
PSPC1-205ENST00000497722 SCN10AQ9Y5Y9 1956 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 KDM6AO15550 1401 aaPredicted RBP0.62□□□□□ -2.31
PSPC1-205ENST00000497722 DOCK3Q8IZD9 2030 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 MYH7BA7E2Y1 1941 aa0.62□□□□□ -2.31
PSPC1-205ENST00000497722 LAMA4Q16363 1823 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 FBN2P35556 2912 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 PEAK1Q9H792 1746 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 IGHV1-58A0A0C4DH39 117 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 A8MWV9 139 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 F8W1H4 67 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 H3BRM9 83 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 HMGB3O15347 200 aaKnown RBP0.61□□□□□ -2.31
PSPC1-205ENST00000497722 CST2P09228 141 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 SRIP30626 198 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 PHB2Q99623 299 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 IMUPQ9GZP8 106 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 TMEM133Q9H2Q1 129 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 PARVBQ9HBI1 364 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 TMEM138Q9NPI0 162 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 MED29Q9NX70 200 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 OPTCQ9UBM4 332 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 PCTPQ9UKL6 214 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 ADGRB2O60241 1585 aa0.61□□□□□ -2.31
PSPC1-205ENST00000497722 RIMBP3CA6NJZ7 1639 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 RIMBP3BA6NNM3 1639 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 RIMBP3Q9UFD9 1639 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 TRAV10A0A0B4J240 114 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 TRAV4A0A0B4J268 109 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 FAM159BA6NKW6 160 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 EFNA4P52798 201 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 RRN3P1Q2M238 152 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 C22orf39Q6P5X5 142 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 HAGHLQ6PII5 290 aaPredicted RBP0.6□□□□□ -2.31
PSPC1-205ENST00000497722 OR11H6Q8NGC7 330 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 OR10K1Q8NGX5 313 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 STAG3L4Q8TBR4 150 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 CHMP6Q96FZ7 201 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 TNS3Q68CZ2 1445 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 FMN1Q68DA7 1419 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 OBSL1O75147 1896 aa0.6□□□□□ -2.31
PSPC1-205ENST00000497722 SNRNP200O75643 2136 aaKnown RBP0.59□□□□□ -2.31
PSPC1-205ENST00000497722 ZNF469Q96JG9 3925 aaPredicted RBP0.59□□□□□ -2.31
PSPC1-205ENST00000497722 TRBV19A0A075B6N1 114 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 TAX1BP3O14907 124 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 NUPR1O60356 82 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 GGCTO75223 188 aaKnown RBP0.59□□□□□ -2.31
PSPC1-205ENST00000497722 BANF1O75531 89 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 ERC2-IT1O76042 136 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 SERPINA1P01009 418 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 IGLV3-1P01715 115 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 HSD11B1P28845 292 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 CAPZBP47756 277 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 UBE2BP63146 152 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 MRPS15P82914 257 aaKnown RBP0.59□□□□□ -2.31
PSPC1-205ENST00000497722 CDK6Q00534 326 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 REEP5Q00765 189 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 TAF1AQ15573 450 aaPredicted RBP0.59□□□□□ -2.31
PSPC1-205ENST00000497722 SPATA8Q6RVD6 105 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 NIT2Q9NQR4 276 aa0.59□□□□□ -2.31
PSPC1-205ENST00000497722 C17orf112F2Z3M2 114 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 M0R233 179 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 RNASE4P34096 147 aaKnown RBP0.58□□□□□ -2.32
PSPC1-205ENST00000497722 ATP5G3P48201 142 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 MRPS25P82663 173 aaKnown RBP0.58□□□□□ -2.32
PSPC1-205ENST00000497722 GOLT1AQ6ZVE7 132 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 Q8IYB0 196 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 OR10X1Q8NGY0 326 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 OR4K15Q8NH41 348 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 LINC00052Q96N35 136 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 ZNF714Q96N38 554 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 C9orf16Q9BUW7 83 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 NPCDR1Q9BY65 106 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 PBOV1Q9GZY1 135 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 PSTPIP2Q9H939 334 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 E9PCH4 1651 aa0.58□□□□□ -2.32
PSPC1-205ENST00000497722 EIF3AQ14152 1382 aaKnown RBP0.57□□□□□ -2.32
PSPC1-205ENST00000497722 MCM3APO60318 1980 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 MYH10P35580 1976 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 TRPM1Q7Z4N2 1603 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 PLXNA4Q9HCM2 1894 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 C1QBP02746 253 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 OR10J4P0C629 311 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 HSPE1P61604 102 aaKnown RBP0.57□□□□□ -2.32
PSPC1-205ENST00000497722 ARF6P62330 175 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 PSMF1Q92530 271 aa0.57□□□□□ -2.32
PSPC1-205ENST00000497722 MUCL1Q96DR8 90 aa0.57□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms