RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 SELENOTP62341 195 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 SLC38A11Q08AI6 406 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 IL15RAQ13261 267 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 LRRC37A5PQ49AS3 106 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 LEMD1Q68G75 181 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 TMEM182Q6ZP80 229 aaPredicted RBP11.81□□□□□ -0.52
LIME1-209ENST00000494776 STX12Q86Y82 276 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 OR8I2Q8N0Y5 310 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 FAM24BQ8N5W8 94 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 TMEM217Q8N7C4 229 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 NMES1Q9C002 83 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 NRN1Q9NPD7 142 aa11.81□□□□□ -0.52
LIME1-209ENST00000494776 LYRM2Q9NU23 88 aaPredicted RBP11.81□□□□□ -0.52
LIME1-209ENST00000494776 PTTG1O95997 202 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 ZNF688P0C7X2 276 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 RAP2BP61225 183 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 C1orf194Q5T5A4 169 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 STPG3Q8N7X2 389 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 DCANP1Q8TF63 244 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 C11orf1Q9H5F2 150 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 SLC25A22Q9H936 323 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 DOK5Q9P104 306 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 SLC45A2Q9UMX9 530 aa11.8□□□□□ -0.52
LIME1-209ENST00000494776 UBE2CO00762 179 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 OR5G3P0C626 314 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 LINC00869P0C866 280 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 S100A11P31949 105 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 SULT1A1P50225 295 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 SNRPD3P62318 126 aaKnown RBP11.79□□□□□ -0.52
LIME1-209ENST00000494776 HBG1P69891 147 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 HBG2P69892 147 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 RAB31Q13636 194 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 STHQ8IWL8 128 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 TMEM252Q8N6L7 170 aa11.79□□□□□ -0.52
LIME1-209ENST00000494776 KIR2DL5BA0A0G2JN68 375 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 KIR2DL5BA0A0G2JPC4 375 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 IGSF23A1L1A6 192 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 E5RGE8 158 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 HYPMO75409 117 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 PSMG4Q5JS54 123 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 S100A7AQ86SG5 101 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 ZNF546Q86UE3 836 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 KIR2DL5AQ8N109 375 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 KIR2DL5BQ8NHK3 375 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 UQCC1Q9NVA1 299 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 HIGD1AQ9Y241 93 aa11.78□□□□□ -0.52
LIME1-209ENST00000494776 ZNF98A6NK75 572 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 AGPAT2O15120 278 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 ID1P41134 155 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 GALR1P47211 349 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 H2BFSP57053 126 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 SLC25A31Q9H0C2 315 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 ARL6Q9H0F7 186 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 CSTL1Q9H114 145 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 ALG5Q9Y673 324 aa11.77□□□□□ -0.53
LIME1-209ENST00000494776 ATP6V1FQ16864 119 aa11.76□□□□□ -0.53
LIME1-209ENST00000494776 DEFB135Q30KP9 77 aa11.76□□□□□ -0.53
LIME1-209ENST00000494776 Q6ZWC4 215 aa11.76□□□□□ -0.53
LIME1-209ENST00000494776 PPP1R1CQ8WVI7 109 aa11.76□□□□□ -0.53
LIME1-209ENST00000494776 SLC25A39Q9BZJ4 359 aaPredicted RBP11.76□□□□□ -0.53
LIME1-209ENST00000494776 OR5AC2Q9NZP5 309 aa11.76□□□□□ -0.53
LIME1-209ENST00000494776 UBE2L5PA0A1B0GUS4 154 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 KNCNA6PVL3 124 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 SPRY2O43597 315 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 PET100P0DJ07 73 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 CAMLGP49069 296 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 PLP1P60201 277 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 BAXQ07812 192 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 ACTL10Q5JWF8 245 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 PXDC1Q5TGL8 231 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 LINC00052Q96N35 136 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 GPR82Q96P67 336 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 MGST2Q99735 147 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 OVOL2Q9BRP0 275 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 SCRT1Q9BWW7 348 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 SLC25A32Q9H2D1 315 aa11.75□□□□□ -0.53
LIME1-209ENST00000494776 SEPSECSQ9HD40 501 aaKnown RBP11.75□□□□□ -0.53
LIME1-209ENST00000494776 H3BRN7 92 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 COX7A2P2O60397 106 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 Q6ZRG5 221 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 UHRF2Q96PU4 802 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 SHANK2-AS3Q9BTD1 123 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 RSG1Q9BU20 258 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 ARV1Q9H2C2 271 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 RNF24Q9Y225 148 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 TP53TG1Q9Y2A0 90 aa11.74□□□□□ -0.53
LIME1-209ENST00000494776 H0YIZ8 118 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 CA1P00915 261 aaPredicted RBP11.73□□□□□ -0.53
LIME1-209ENST00000494776 ATF4P18848 351 aaPredicted RBP11.73□□□□□ -0.53
LIME1-209ENST00000494776 PSMB3P49720 205 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 MEOX2P50222 304 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 EWSR1Q01844 656 aaKnown RBP eCLIP11.73□□□□□ -0.53
LIME1-209ENST00000494776 NHLH2Q02577 135 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 FGL1Q08830 312 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 RGS21Q2M5E4 152 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 VWC2Q2TAL6 325 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 SAMD13Q5VXD3 122 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 MUC7Q8TAX7 377 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 C16orf92Q96LL3 132 aa11.73□□□□□ -0.53
LIME1-209ENST00000494776 MED28Q9H204 178 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms