RNA–Protein interactions for RNA: ENST00000492954.1

PTPRU-207, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 625 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-207ENST00000492954 PSENENQ9NZ42 101 aa13.08□□□□□ -0.32
PTPRU-207ENST00000492954 NDUFA13Q9P0J0 144 aa13.08□□□□□ -0.32
PTPRU-207ENST00000492954 SOCS3O14543 225 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 PLA2G10O15496 165 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 HLA-DRB4P13762 266 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 GDF5OSQ5U4N7 250 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 TMEM182Q6ZP80 229 aaPredicted RBP13.07□□□□□ -0.32
PTPRU-207ENST00000492954 OR8I2Q8N0Y5 310 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 LINC00052Q96N35 136 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 HLA-DRB4X5D2U9 266 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 X6R8D5 127 aa13.07□□□□□ -0.32
PTPRU-207ENST00000492954 CCNKO75909 580 aa13.06□□□□□ -0.32
PTPRU-207ENST00000492954 SCGB1D2O95969 90 aa13.06□□□□□ -0.32
PTPRU-207ENST00000492954 MIFP14174 115 aa13.06□□□□□ -0.32
PTPRU-207ENST00000492954 IAH1Q2TAA2 248 aaPredicted RBP13.06□□□□□ -0.32
PTPRU-207ENST00000492954 C20orf85Q9H1P6 137 aa13.06□□□□□ -0.32
PTPRU-207ENST00000492954 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
PTPRU-207ENST00000492954 TBC1D24Q9ULP9 559 aa13.06□□□□□ -0.32
PTPRU-207ENST00000492954 SMCO3A2RU48 225 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 PMS2P5A8MQ11 134 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 LYRM1O43325 122 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 CFDP00746 253 aaPredicted RBP13.05□□□□□ -0.32
PTPRU-207ENST00000492954 IGKV3-20P01619 116 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 ORM2P19652 201 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 ID1P41134 155 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 PSMB3P49720 205 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 PAX9P55771 341 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 NUTF2P61970 127 aaKnown RBP13.05□□□□□ -0.32
PTPRU-207ENST00000492954 TMEM144Q7Z5S9 345 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 BPIFCQ8NFQ6 507 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 MITD1Q8WV92 249 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 SMIM8Q96KF7 97 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 SLC25A32Q9H2D1 315 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 SLC25A22Q9H936 323 aa13.05□□□□□ -0.32
PTPRU-207ENST00000492954 EPPK1P58107 5090 aaKnown RBP13.04□□□□□ -0.32
PTPRU-207ENST00000492954 ZNF98A6NK75 572 aa13.04□□□□□ -0.32
PTPRU-207ENST00000492954 CNPY1Q3B7I2 92 aa13.04□□□□□ -0.32
PTPRU-207ENST00000492954 ZBTB8BQ8NAP8 495 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-207ENST00000492954 SAV1Q9H4B6 383 aaPredicted RBP13.04□□□□□ -0.32
PTPRU-207ENST00000492954 GSKIPQ9P0R6 139 aa13.04□□□□□ -0.32
PTPRU-207ENST00000492954 SLC45A2Q9UMX9 530 aa13.04□□□□□ -0.32
PTPRU-207ENST00000492954 ELOA3CA0A087WX78 387 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-207ENST00000492954 METTL15P1P0C7V9 234 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 GALR1P47211 349 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 FXYD7P58549 80 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 RRAS2P62070 204 aaPredicted RBP13.03□□□□□ -0.32
PTPRU-207ENST00000492954 FOXI2Q6ZQN5 318 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 CYP2G1PQ6ZSU1 146 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 OR1B1Q8NGR6 318 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 TMEM147Q9BVK8 224 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 C1QTNF4Q9BXJ3 329 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 HRH4Q9H3N8 390 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 DOK5Q9P104 306 aa13.03□□□□□ -0.32
PTPRU-207ENST00000492954 ISLRO14498 428 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 CCSO14618 274 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 TCRBP04435 133 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 TMEM14EPQ6UXP3 125 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 C20orf173Q96LM9 149 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 C17orf77Q96MU5 243 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 RSG1Q9BU20 258 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 SCRT1Q9BWW7 348 aa13.02□□□□□ -0.33
PTPRU-207ENST00000492954 RCL1Q9Y2P8 373 aaKnown RBP13.02□□□□□ -0.33
PTPRU-207ENST00000492954 TRAV6A0A075B6T7 132 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 F6UB75 175 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 MBPP02686 304 aaPredicted RBP13.01□□□□□ -0.33
PTPRU-207ENST00000492954 IL5P05113 134 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 HLA-DMBP28068 263 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 DLK1P80370 383 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 OR4B1Q8NGF8 309 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 C2CD4CQ8TF44 421 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 C16orf92Q96LL3 132 aa13.01□□□□□ -0.33
PTPRU-207ENST00000492954 MEOX2P50222 304 aa13□□□□□ -0.33
PTPRU-207ENST00000492954 TAS2R30P59541 319 aa13□□□□□ -0.33
PTPRU-207ENST00000492954 OR10P1Q8NGE3 313 aa13□□□□□ -0.33
PTPRU-207ENST00000492954 SEC22CQ9BRL7 303 aa13□□□□□ -0.33
PTPRU-207ENST00000492954 NUDT15Q9NV35 164 aa13□□□□□ -0.33
PTPRU-207ENST00000492954 CELA1Q9UNI1 258 aa13□□□□□ -0.33
PTPRU-207ENST00000492954 H3BRN7 92 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 TSC22D2O75157 780 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 LINC00869P0C866 280 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 ARL16Q0P5N6 197 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 SAMD13Q5VXD3 122 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 Q6ZTC4 211 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 ZNF709Q8N972 641 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 CLUHP3Q96NS8 147 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 CCDC32Q9BV29 185 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 SLC25A39Q9BZJ4 359 aaPredicted RBP12.99□□□□□ -0.33
PTPRU-207ENST00000492954 HIGD1AQ9Y241 93 aa12.99□□□□□ -0.33
PTPRU-207ENST00000492954 KMT2AQ03164 3969 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 A0A0J9YX75 114 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 C7orf66A4D0T2 115 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 IGLL5B9A064 214 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 C11orf94C9JXX5 98 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 FNDC10F2Z333 226 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 HYPMO75409 117 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 S100A7P31151 101 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 RAP2BP61225 183 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 FAM78BQ5VT40 261 aa12.98□□□□□ -0.33
PTPRU-207ENST00000492954 SPATA31B1PQ5VZV4 182 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms