RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 OR5R1Q8NH85 324 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 OR2T6Q8NHC8 308 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 MBD6Q96DN6 1003 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 FNDC4Q9H6D8 234 aaPredicted RBP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 CLEC5AQ9NY25 188 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 C21orf62Q9NYP8 219 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 TMA7Q9Y2S6 64 aaKnown RBP5.04□□□□□ -1.6
SF3A3-208ENST00000489537 NAV3Q8IVL0 2385 aa5.04□□□□□ -1.6
SF3A3-208ENST00000489537 ZANQ9Y493 2812 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 FN1P02751 2386 aaKnown RBP5.03□□□□□ -1.6
SF3A3-208ENST00000489537 IGLV11-55A0A075B6I3 123 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 TRBV24-1A0A075B6N3 115 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 IGKV1OR2-108A0A075B7D4 117 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 IGHV4-61A0A0C4DH41 118 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 A0A0G2JLM5 398 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 TMEM89A2RUT3 159 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 HELTA6NFD8 242 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 E7EUB6 86 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 BMPR1BO00238 502 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 IGLC1P0CG04 106 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 MED14OSP0DP75 135 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 HIST1H1EP10412 219 aaKnown RBP5.03□□□□□ -1.6
SF3A3-208ENST00000489537 MYOD1P15172 320 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 RPL7P18124 248 aaKnown RBP5.03□□□□□ -1.6
SF3A3-208ENST00000489537 RAB5AP20339 215 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 KLRD1Q13241 179 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 ADIRFQ15847 76 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 ZNF674Q2M3X9 581 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 C10orf55Q5SWW7 151 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 TMEM88Q6PEY1 159 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 LCNL1Q6ZST4 164 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 SSX7Q7RTT5 188 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 LINC00305Q7Z4B0 112 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 Q8N9W7 124 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 EEF1AKMT3Q96AZ1 226 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 USMG5Q96IX5 58 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 RITA1Q96K30 269 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 SMR3AQ99954 134 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 ZNF355PQ9NSJ1 428 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 RFNGQ9Y644 331 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 FLNAP21333 2647 aaKnown RBP5.03□□□□□ -1.6
SF3A3-208ENST00000489537 ABCA2Q9BZC7 2435 aa5.03□□□□□ -1.6
SF3A3-208ENST00000489537 CUBNO60494 3623 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 IGKV1D-37A0A075B6S9 117 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 IGHV7-81A0A0B4J1V7 117 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 PSMB11A5LHX3 300 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 COLCA2A8K830 154 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 PPP5D1E7EU14 171 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 FCN1O00602 326 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 ZNF253O75346 499 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 NDUFB4O95168 129 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 REG1AP05451 166 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 OR10J4P0C629 311 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 NBEAP1P0C6P0 100 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 ORM2P19652 201 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 CNTFRP26992 372 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 BMI1P35226 326 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 AKR1C3P42330 323 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 GNG4P50150 75 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 FAM3BP58499 235 aaPredicted RBP5.02□□□□□ -1.61
SF3A3-208ENST00000489537 UBE2G1P62253 170 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 RPL23P62829 140 aaKnown RBP5.02□□□□□ -1.61
SF3A3-208ENST00000489537 PSG9Q00887 426 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 FOXL1Q12952 345 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 DEFB113Q30KQ7 82 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 Q56UQ5 140 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 C1orf194Q5T5A4 169 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 UNQ5815/PRO19632Q6UWF5 114 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 ZNF600Q6ZNG1 722 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 MIR17HGQ75NE6 70 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 CBLN2Q8IUK8 224 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 C5orf17Q8NAS9 161 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 OR1B1Q8NGR6 318 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 CMTM2Q8TAZ6 248 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 TMEM37Q8WXS4 190 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 RNF125Q96EQ8 232 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 FMC1Q96HJ9 113 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 TMPRSS5Q9H3S3 457 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 HIF1ANQ9NWT6 349 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 MRPL27Q9P0M9 148 aaKnown RBP5.02□□□□□ -1.61
SF3A3-208ENST00000489537 CDC42EP3Q9UKI2 254 aa5.02□□□□□ -1.61
SF3A3-208ENST00000489537 IGHV4-30-2A0A087WSY4 118 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 TRBV9A0A0B4J1U6 114 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 TRAV40A0A0B4J280 105 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 K7EIM0 57 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 AP4M1O00189 453 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 IGF1P05019 195 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 PSG1P11464 419 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 CSN1S1P47710 185 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 LINC00310P59036 64 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 UBE2G2P60604 165 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 LYZP61626 148 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 ATP5G2Q06055 141 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 GCSAMLQ5JQS6 135 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 SAMD13Q5VXD3 122 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 C9orf139Q6ZV77 190 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 LINC01551Q86U37 167 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 C5orf56Q8N8D9 126 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 OR10G8Q8NGN5 311 aa5.01□□□□□ -1.61
SF3A3-208ENST00000489537 FAM210BQ96KR6 192 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 102.3 ms