RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 Q6ZRG5 221 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 OR1B1Q8NGR6 318 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 PPP1R14BQ96C90 147 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 FBXL17Q9UF56 701 aa12.02□□□□□ -0.49
HDAC7-224ENST00000488927 OR4C46A6NHA9 309 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 ZNF785A8K8V0 405 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 RPL29P47914 159 aaKnown RBP12.01□□□□□ -0.49
HDAC7-224ENST00000488927 FAM90A2PQ658T7 463 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 C16orf54Q6UWD8 224 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 TMEM182Q6ZP80 229 aaPredicted RBP12.01□□□□□ -0.49
HDAC7-224ENST00000488927 TCF24Q7RTU0 167 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 ZNF709Q8N972 641 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 PRR25Q96S07 402 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 GGTLC1Q9BX51 225 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 TNFSF18Q9UNG2 199 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 HIGD1AQ9Y241 93 aa12.01□□□□□ -0.49
HDAC7-224ENST00000488927 ELOA3CA0A087WX78 387 aaPredicted RBP12□□□□□ -0.49
HDAC7-224ENST00000488927 IGHV3-66A0A0C4DH42 116 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 C17orf112F2Z3M2 114 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 RPL11P62913 178 aaKnown RBP12□□□□□ -0.49
HDAC7-224ENST00000488927 ZNF266Q14584 549 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 OPCMLQ14982 345 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 STPG3Q8N7X2 389 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 SCGB1C1Q8TD33 95 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 NEURL2Q9BR09 285 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 NPCDR1Q9BY65 106 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 PARD6GQ9BYG4 376 aaPredicted RBP12□□□□□ -0.49
HDAC7-224ENST00000488927 WDR61Q9GZS3 305 aaKnown RBP12□□□□□ -0.49
HDAC7-224ENST00000488927 ARL6Q9H0F7 186 aa12□□□□□ -0.49
HDAC7-224ENST00000488927 MEGF8Q7Z7M0 2845 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 TRAV2A0A0B4J234 112 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 G3V3Q6 166 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 PRB2P02812 416 aaPredicted RBP11.99□□□□□ -0.49
HDAC7-224ENST00000488927 OR5G3P0C626 314 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 B2MP61769 119 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 PRR20EP86478 221 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 PRR20CP86479 221 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 PRR20DP86480 221 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 PRR20BP86481 221 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 PRR20AP86496 221 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 OR1L4Q8NGR5 311 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 GLMPQ8WWB7 406 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 GPR82Q96P67 336 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 PFDN5Q99471 154 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 SMIM3Q9BZL3 60 aa11.99□□□□□ -0.49
HDAC7-224ENST00000488927 DNASE2O00115 360 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-224ENST00000488927 COX7A2P2O60397 106 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 CMC4P56277 68 aaPredicted RBP11.98□□□□□ -0.49
HDAC7-224ENST00000488927 MIC13Q5XKP0 118 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 SIGLEC15Q6ZMC9 328 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 OR8I2Q8N0Y5 310 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 MRAPQ8TCY5 172 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 ARV1Q9H2C2 271 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 SLC39A9Q9NUM3 307 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 DOK5Q9P104 306 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 SORL1Q92673 2214 aa11.98□□□□□ -0.49
HDAC7-224ENST00000488927 RNF222A6NCQ9 220 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 ZNF98A6NK75 572 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 K7EIL1 84 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 CD81P60033 236 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 FAM110AQ9BQ89 295 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 SHANK2-AS3Q9BTD1 123 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 SLC25A39Q9BZJ4 359 aaPredicted RBP11.97□□□□□ -0.49
HDAC7-224ENST00000488927 MS4A6AQ9H2W1 248 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 DNAJC4Q9NNZ3 241 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 PXMP4Q9Y6I8 212 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 SMAD5-AS1Q9Y6J3 95 aa11.97□□□□□ -0.49
HDAC7-224ENST00000488927 hCG_2014768A0A024R1R8 64 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 HMSDA8MTL9 139 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 H3BRN7 92 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 TAAR5O14804 337 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 ARPC5O15511 151 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 GALR1P47211 349 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 SAMD13Q5VXD3 122 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 C10orf113Q5VZT2 155 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 TCTE3Q8IZS6 198 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 GATAD1Q8WUU5 269 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 MFFQ9GZY8 342 aa11.96□□□□□ -0.49
HDAC7-224ENST00000488927 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 BORCS7-ASMTA0A0B4J1R7 106 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 SMLR1H3BR10 107 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 RPL7P18124 248 aaKnown RBP11.95□□□□□ -0.5
HDAC7-224ENST00000488927 ZNF345Q14585 488 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 DEFB121Q5J5C9 76 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 LINC00305Q7Z4B0 112 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 AKAP14Q86UN6 197 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 Q8N1Y9 231 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 GBGT1Q8N5D6 347 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 STXBP6Q8NFX7 210 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 ST6GAL2Q96JF0 529 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 SLC25A22Q9H936 323 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 WFDC1Q9HC57 220 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 NRN1Q9NPD7 142 aa11.95□□□□□ -0.5
HDAC7-224ENST00000488927 CD7P09564 240 aa11.94□□□□□ -0.5
HDAC7-224ENST00000488927 TFPI2P48307 235 aa11.94□□□□□ -0.5
HDAC7-224ENST00000488927 PATE2Q6UY27 113 aa11.94□□□□□ -0.5
HDAC7-224ENST00000488927 TMEM37Q8WXS4 190 aa11.94□□□□□ -0.5
HDAC7-224ENST00000488927 UHRF2Q96PU4 802 aa11.94□□□□□ -0.5
HDAC7-224ENST00000488927 SCRT1Q9BWW7 348 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms