RNA–Protein interactions for RNA: ENST00000488087.1

ECHDC1-217, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 3

Gene ECHDC1, Length 473 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-217ENST00000488087 CEBPZOSA8MTT3 80 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 C9JCJ5 164 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 HMGB3O15347 200 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 HLA-DQA1P01909 254 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 GYPBP06028 91 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 OR5AL1P0C617 328 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 PMCHP20382 165 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 RPS12P25398 132 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 DNASE1L1P49184 302 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 ZNF83P51522 516 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 DYNLT3P51808 116 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 NCBP2P52298 156 aaKnown RBP eCLIP2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 DLX1P56177 255 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 UBE2G1P62253 170 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 GRB2P62993 217 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 KLRD1Q13241 179 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 ZNF726P1Q15940 193 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 LRRC75BQ2VPJ9 315 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 GCSAMLQ5JQS6 135 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 SLC48A1Q6P1K1 146 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 LCN15Q6UWW0 184 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 OLIG3Q7RTU3 272 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 SPATA12Q7Z6I5 190 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 OR5C1Q8NGR4 320 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 OR10AG1Q8NH19 301 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 ZNF502Q8TBZ5 544 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 OR51E1Q8TCB6 317 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 TSKUQ8WUA8 353 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 BLNKQ8WV28 456 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 RNF138Q8WVD3 245 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 PP6455Q8WZ26 134 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 KLK6Q92876 244 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 FGF14Q92915 247 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 SLC25A44Q96H78 314 aaPredicted RBP2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 AP1S3Q96PC3 154 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 OR2A5Q96R48 311 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 SDF2Q99470 211 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 GGTLC1Q9BX51 225 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 SPANXDQ9BXN6 97 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 TMEM126AQ9H061 195 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 RETNQ9HD89 108 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 KCNIP2Q9NS61 270 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 TAS2R4Q9NYW5 299 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 TAAR3PQ9P1P4 343 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 HSPB8Q9UJY1 196 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 LSM7Q9UK45 103 aaKnown RBP2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 ZNF835Q9Y2P0 537 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 TSSC4Q9Y5U2 329 aaPredicted RBP2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 R4GMQ9 66 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 ARL2-SNX15V9GYD0 113 aa2.59□□□□□ -1.99
ECHDC1-217ENST00000488087 MCM3APO60318 1980 aa2.59□□□□□ -2
ECHDC1-217ENST00000488087 NUP214P35658 2090 aaPredicted RBP2.59□□□□□ -2
ECHDC1-217ENST00000488087 NLRC5Q86WI3 1866 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 CASP8AP2Q9UKL3 1982 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 IGKV1D-8A0A087WSZ0 117 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 A0A087WX48 190 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 A0A0D9SEW6 157 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 A0A0G2JLM5 398 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 MDFIC2A0A1B0GVS7 189 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 A0A1B0GWA3 101 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 FAM24AA6NFZ4 105 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 C15orf65H3BRN8 121 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 PANO1I0J062 215 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 SDCBPO00560 298 aaPredicted RBP2.58□□□□□ -2
ECHDC1-217ENST00000488087 PLPP3O14495 311 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 SNAI2O43623 268 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 SYNGR1O43759 233 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 FOXH1O75593 365 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 BGLAPP02818 100 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 RHOCP08134 193 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 COX8AP10176 69 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 FABP2P12104 132 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 SPINT3P49223 89 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 MLF1P58340 268 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 TGFBR3Q03167 851 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 OR8B8Q15620 311 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 ZNF141Q15928 474 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 RPEL1Q2QD12 228 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 NMSQ5H8A3 153 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 TIMM23BQ5SRD1 257 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 Q6Q795 121 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 TMEM136Q6ZRR5 245 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 PRSS41Q7RTY9 318 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 MKXQ8IYA7 352 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 ZNF645Q8N7E2 425 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 ZNF439Q8NDP4 499 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 OR4X2Q8NGF9 303 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 OR5D14Q8NGL3 314 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 OR6K6Q8NGW6 343 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 OR4A5Q8NH83 315 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 OR1L1Q8NH94 360 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 PIFOQ8TCI5 191 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 SCGB1C1Q8TD33 95 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 RTN4IP1Q8WWV3 396 aaPredicted RBP2.58□□□□□ -2
ECHDC1-217ENST00000488087 TMEM54Q969K7 222 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 PTH2Q96A98 100 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 APOBEC3DQ96AK3 386 aaPredicted RBP2.58□□□□□ -2
ECHDC1-217ENST00000488087 CHCHD1Q96BP2 118 aaKnown RBP2.58□□□□□ -2
ECHDC1-217ENST00000488087 ZNF799Q96GE5 643 aa2.58□□□□□ -2
ECHDC1-217ENST00000488087 NMNAT3Q96T66 252 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms