RNA–Protein interactions for RNA: ENST00000478582.5

CCM2-211, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 937 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-211ENST00000478582 Q6ZNX1 250 aa20.04■□□□□ 0.8
CCM2-211ENST00000478582 NEURL2Q9BR09 285 aa20.04■□□□□ 0.8
CCM2-211ENST00000478582 UBE2L5PA0A1B0GUS4 154 aa20.03■□□□□ 0.8
CCM2-211ENST00000478582 OR4C46A6NHA9 309 aa20.03■□□□□ 0.8
CCM2-211ENST00000478582 MPDU1O75352 247 aa20.03■□□□□ 0.8
CCM2-211ENST00000478582 CD81P60033 236 aa20.03■□□□□ 0.8
CCM2-211ENST00000478582 C1orf194Q5T5A4 169 aa20.03■□□□□ 0.8
CCM2-211ENST00000478582 PXDC1Q5TGL8 231 aa20.03■□□□□ 0.8
CCM2-211ENST00000478582 OR2T35Q8NGX2 323 aa20.03■□□□□ 0.8
CCM2-211ENST00000478582 TRAV2A0A0B4J234 112 aa20.02■□□□□ 0.8
CCM2-211ENST00000478582 HELTA6NFD8 242 aa20.02■□□□□ 0.8
CCM2-211ENST00000478582 CD7P09564 240 aa20.02■□□□□ 0.8
CCM2-211ENST00000478582 NHLRC4P0CG21 123 aaPredicted RBP20.02■□□□□ 0.8
CCM2-211ENST00000478582 ORM2P19652 201 aa20.02■□□□□ 0.8
CCM2-211ENST00000478582 S100A7P31151 101 aa20.02■□□□□ 0.8
CCM2-211ENST00000478582 AP2S1P53680 142 aaPredicted RBP20.02■□□□□ 0.8
CCM2-211ENST00000478582 PAFAH1B2P68402 229 aa20.02■□□□□ 0.8
CCM2-211ENST00000478582 GGTLC1Q9BX51 225 aa20.02■□□□□ 0.8
CCM2-211ENST00000478582 COL7A1Q02388 2944 aa20.02■□□□□ 0.79
CCM2-211ENST00000478582 A8MZ25 164 aa20.01■□□□□ 0.79
CCM2-211ENST00000478582 CLINT1Q14677 625 aa20.01■□□□□ 0.79
CCM2-211ENST00000478582 OR1B1Q8NGR6 318 aa20.01■□□□□ 0.79
CCM2-211ENST00000478582 C19orf73Q9NVV2 129 aa20.01■□□□□ 0.79
CCM2-211ENST00000478582 HYPMO75409 117 aa20■□□□□ 0.79
CCM2-211ENST00000478582 FGF7P21781 194 aa20■□□□□ 0.79
CCM2-211ENST00000478582 RPL29P47914 159 aaKnown RBP20■□□□□ 0.79
CCM2-211ENST00000478582 PRR20EP86478 221 aa20■□□□□ 0.79
CCM2-211ENST00000478582 PRR20CP86479 221 aa20■□□□□ 0.79
CCM2-211ENST00000478582 PRR20DP86480 221 aa20■□□□□ 0.79
CCM2-211ENST00000478582 PRR20BP86481 221 aa20■□□□□ 0.79
CCM2-211ENST00000478582 PRR20AP86496 221 aa20■□□□□ 0.79
CCM2-211ENST00000478582 AQP10Q96PS8 301 aa20■□□□□ 0.79
CCM2-211ENST00000478582 ATP5SQ99766 215 aa20■□□□□ 0.79
CCM2-211ENST00000478582 FAM110AQ9BQ89 295 aa20■□□□□ 0.79
CCM2-211ENST00000478582 MS4A6AQ9H2W1 248 aa20■□□□□ 0.79
CCM2-211ENST00000478582 G3V3Q6 166 aa19.99■□□□□ 0.79
CCM2-211ENST00000478582 RPL11P62913 178 aaKnown RBP19.99■□□□□ 0.79
CCM2-211ENST00000478582 OPCMLQ14982 345 aa19.99■□□□□ 0.79
CCM2-211ENST00000478582 PPP1R14BQ96C90 147 aa19.99■□□□□ 0.79
CCM2-211ENST00000478582 ARL6Q9H0F7 186 aa19.99■□□□□ 0.79
CCM2-211ENST00000478582 FBXL17Q9UF56 701 aa19.99■□□□□ 0.79
CCM2-211ENST00000478582 HIGD1AQ9Y241 93 aa19.99■□□□□ 0.79
CCM2-211ENST00000478582 IGKV3-7A0A075B6H7 116 aa19.98■□□□□ 0.79
CCM2-211ENST00000478582 PATE2Q6UY27 113 aa19.98■□□□□ 0.79
CCM2-211ENST00000478582 GBGT1Q8N5D6 347 aa19.98■□□□□ 0.79
CCM2-211ENST00000478582 WDR61Q9GZS3 305 aaKnown RBP19.98■□□□□ 0.79
CCM2-211ENST00000478582 DOK5Q9P104 306 aa19.98■□□□□ 0.79
CCM2-211ENST00000478582 ZNF98A6NK75 572 aa19.97■□□□□ 0.79
CCM2-211ENST00000478582 CMC4P56277 68 aaPredicted RBP19.97■□□□□ 0.79
CCM2-211ENST00000478582 MIC13Q5XKP0 118 aa19.97■□□□□ 0.79
CCM2-211ENST00000478582 SIGLEC15Q6ZMC9 328 aa19.97■□□□□ 0.79
CCM2-211ENST00000478582 S100A7AQ86SG5 101 aa19.97■□□□□ 0.79
CCM2-211ENST00000478582 NPCDR1Q9BY65 106 aa19.97■□□□□ 0.79
CCM2-211ENST00000478582 SLC25A39Q9BZJ4 359 aaPredicted RBP19.97■□□□□ 0.79
CCM2-211ENST00000478582 OR11H12B2RN74 326 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 H3BRN7 92 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 DNASE2O00115 360 aaPredicted RBP19.96■□□□□ 0.79
CCM2-211ENST00000478582 OR5G3P0C626 314 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 IGHV4-30-4P0DP06 118 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 Q6ZRG5 221 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 SHANK2-AS3Q9BTD1 123 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 ARV1Q9H2C2 271 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 SLC39A9Q9NUM3 307 aa19.96■□□□□ 0.79
CCM2-211ENST00000478582 ELOA3CA0A087WX78 387 aaPredicted RBP19.95■□□□□ 0.78
CCM2-211ENST00000478582 TFPI2P48307 235 aa19.95■□□□□ 0.78
CCM2-211ENST00000478582 STXBP6Q8NFX7 210 aa19.95■□□□□ 0.78
CCM2-211ENST00000478582 DCANP1Q8TF63 244 aa19.95■□□□□ 0.78
CCM2-211ENST00000478582 ASCL2Q99929 193 aa19.95■□□□□ 0.78
CCM2-211ENST00000478582 PARD6GQ9BYG4 376 aaPredicted RBP19.95■□□□□ 0.78
CCM2-211ENST00000478582 SMIM3Q9BZL3 60 aa19.95■□□□□ 0.78
CCM2-211ENST00000478582 TNFSF18Q9UNG2 199 aa19.95■□□□□ 0.78
CCM2-211ENST00000478582 K7EQG2 157 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 B2MP61769 119 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 ODF3L2Q3SX64 289 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 OR8I2Q8N0Y5 310 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 INO80EQ8NBZ0 244 aaPredicted RBP19.94■□□□□ 0.78
CCM2-211ENST00000478582 GPR82Q96P67 336 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 WFDC1Q9HC57 220 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 NRN1Q9NPD7 142 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 RNF24Q9Y225 148 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 PXMP4Q9Y6I8 212 aa19.94■□□□□ 0.78
CCM2-211ENST00000478582 FXYD6-FXYD2A0A087WZ82 144 aa19.93■□□□□ 0.78
CCM2-211ENST00000478582 IFNA5P01569 189 aa19.93■□□□□ 0.78
CCM2-211ENST00000478582 WFDC3Q8IUB2 231 aa19.93■□□□□ 0.78
CCM2-211ENST00000478582 DEFB125Q8N687 156 aa19.93■□□□□ 0.78
CCM2-211ENST00000478582 TMEM37Q8WXS4 190 aa19.93■□□□□ 0.78
CCM2-211ENST00000478582 SCRT1Q9BWW7 348 aa19.93■□□□□ 0.78
CCM2-211ENST00000478582 DNAJC4Q9NNZ3 241 aa19.93■□□□□ 0.78
CCM2-211ENST00000478582 COX7A2P2O60397 106 aa19.92■□□□□ 0.78
CCM2-211ENST00000478582 OR1L4Q8NGR5 311 aa19.92■□□□□ 0.78
CCM2-211ENST00000478582 UHRF2Q96PU4 802 aa19.92■□□□□ 0.78
CCM2-211ENST00000478582 WFDC10AQ9H1F0 79 aa19.92■□□□□ 0.78
CCM2-211ENST00000478582 SLC25A32Q9H2D1 315 aa19.92■□□□□ 0.78
CCM2-211ENST00000478582 KCNIP2Q9NS61 270 aa19.92■□□□□ 0.78
CCM2-211ENST00000478582 U3KQK5 164 aa19.92■□□□□ 0.78
CCM2-211ENST00000478582 RNF222A6NCQ9 220 aa19.91■□□□□ 0.78
CCM2-211ENST00000478582 FRMD6-AS1P0C7T7 363 aa19.91■□□□□ 0.78
CCM2-211ENST00000478582 C10orf113Q5VZT2 155 aa19.91■□□□□ 0.78
CCM2-211ENST00000478582 ZNF709Q8N972 641 aa19.91■□□□□ 0.78
CCM2-211ENST00000478582 SCGB1C1Q8TD33 95 aa19.91■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms