RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 DGAT2L6Q6ZPD8 337 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 SSX8Q7RTT4 187 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 KTN1-AS1Q86SY8 53 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 MSRB3Q8IXL7 192 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 LINC00311Q8N616 119 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 ZNF709Q8N972 641 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 LY6G5BQ8NDX9 201 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 OR4X2Q8NGF9 303 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 OR52N5Q8NH56 324 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 OR52P1PQ8NH57 321 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 OR51H1Q8NH63 302 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 VSTM2AQ8TAG5 236 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 RPS4Y2Q8TD47 263 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 BORCS8Q96FH0 119 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 AQP10Q96PS8 301 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 TBL1YQ9BQ87 522 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 PRSS27Q9BQR3 290 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 C20orf78Q9BR46 151 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 TM2D3Q9BRN9 247 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 SHANK2-AS3Q9BTD1 123 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 SCRT1Q9BWW7 348 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 AICDAQ9GZX7 198 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 Q9HAA7 133 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 TMEM242Q9NWH2 141 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 TXNL4BQ9NX01 149 aaKnown RBP1.81□□□□□ -2.12
XRN1-211ENST00000477237 MARCOQ9UEW3 520 aaPredicted RBP1.81□□□□□ -2.12
XRN1-211ENST00000477237 AK3Q9UIJ7 227 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 PCTPQ9UKL6 214 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 SPCS1Q9Y6A9 102 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 PATJQ8NI35 1801 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 DSPPQ9NZW4 1301 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 KMT2EQ8IZD2 1858 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 SCN10AQ9Y5Y9 1956 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 ARHGEF5Q12774 1597 aa1.81□□□□□ -2.12
XRN1-211ENST00000477237 PHRF1Q9P1Y6 1649 aaKnown RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 PIK3C2AO00443 1686 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 THSD7AQ9UPZ6 1657 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 TSPOAP1O95153 1857 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MYLKQ15746 1914 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MICAL3Q7RTP6 2002 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 DOCK6Q96HP0 2047 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 TRBV20-1A0A075B6N2 111 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 TRAV12-2A0A075B6T6 113 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 IGHV4-30-2A0A087WSY4 118 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 IGKV1D-8A0A087WSZ0 117 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MUC21A0A0G2JKD1 596 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 A0A0J9YW62 118 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MUC21A0A140T8X8 626 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 KANTRA0A1W2PQU2 76 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 SNRPGP15A8MWD9 76 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 OOSP1A8MZH6 123 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 NDUFC2-KCTD14E9PQ53 114 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 F6UB75 175 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 FFAR1O14842 300 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 TNFSF12O43508 249 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 SS18L1O75177 396 aaPredicted RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 SCRG1O75711 98 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 GYPAP02724 150 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 ATP1B1P05026 303 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 SLC25A4P12235 298 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 PPIBP23284 216 aaKnown RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 GADD45AP24522 165 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 RPL22P35268 128 aaKnown RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 ASIPP42127 132 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 P2RX1P51575 399 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 TAS2R19P59542 299 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 LSM3P62310 102 aaKnown RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 QRFPP83859 136 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 ERCC8Q13216 396 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MSMO1Q15800 293 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 CST6Q15828 149 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 IGFBP7Q16270 282 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 RTL8BQ17RB0 113 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 C2orf83Q53S99 150 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MUC21Q5SSG8 566 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 ZNF880Q6PDB4 577 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 Q6ZVQ6 151 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 PCP2Q8IVA1 136 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 DEFB107AQ8IZN7 70 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 SLC22A24Q8N4F4 322 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 C10orf126Q8N4M7 172 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 OR10AG1Q8NH19 301 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 MYOZ3Q8TDC0 251 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 IL1F10Q8WWZ1 152 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 CCL17Q92583 94 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 LSM10Q969L4 123 aaKnown RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 S100A16Q96FQ6 103 aaKnown RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 RNF185Q96GF1 192 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 METTL26Q96S19 204 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 SRXN1Q9BYN0 137 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 AGPAT4-IT1Q9H0P7 198 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 SMDT1Q9H4I9 107 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 NAA60Q9H7X0 242 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 C19orf25Q9UFG5 118 aaPredicted RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 ANAPC10Q9UM13 185 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 KLK5Q9Y337 293 aaPredicted RBP1.8□□□□□ -2.12
XRN1-211ENST00000477237 PXMP4Q9Y6I8 212 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 GON4LQ3T8J9 2241 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 PTPRMP28827 1452 aa1.8□□□□□ -2.12
XRN1-211ENST00000477237 LRP5O75197 1615 aa1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms