RNA–Protein interactions for RNA: ENST00000476664.1

LRCH3-215, Transcript of leucine rich repeats and calponin homology domain containing 3, human

TSL 3

Gene LRCH3, Length 227 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LRCH3-215	ENST00000476664	IGSF23	A1L1A6	192 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664		H7C1C5	153 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	KPNA4	O00629	521 aa	Predicted RBP	4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	GPR75	O95800	540 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	MDK	P21741	143 aa	Predicted RBP	4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	LCN6	P62502	163 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	GNG5	P63218	68 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	TNFAIP6	P98066	277 aa	Predicted RBP	4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	C12orf74	Q32Q52	190 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	RNF212	Q495C1	297 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	TMEM128	Q5BJH2	165 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	LCE4A	Q5TA78	99 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	FAM104B	Q5XKR9	115 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	C1orf174	Q8IYL3	243 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	UMODL1-AS1	Q8N2C9	162 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	SLC22A24	Q8N4F4	322 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	EIF4E3	Q8N5X7	224 aa	Known RBP	4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	C9orf106	Q8NAJ2	232 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	OR9A2	Q8NGT5	310 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	LZIC	Q8WZA0	190 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	GPR82	Q96P67	336 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	PEBP4	Q96S96	227 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	NMNAT3	Q96T66	252 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	CCDC90B	Q9GZT6	254 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	TNFRSF19	Q9NS68	423 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZNF580	Q9UK33	172 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	SCN3A	Q9NY46	2000 aa		4.58	□□□□□ -1.68
LRCH3-215	ENST00000476664	hCG_1818297	A0A087WSY0	165 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	IGHV3-43	A0A0B4J1X8	118 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	LINC00862	A6NCI5	91 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	IZUMO1R	A6ND01	250 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	EFCAB10	A6NFE3	127 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	OR5H14	A6NHG9	310 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664		A8MT66	165 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	KRTAP29-1	A8MX34	341 aa	Predicted RBP	4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664		K7ERS5	55 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	ARPC5	O15511	151 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	OPRK1	P41145	380 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	RPS20	P60866	119 aa	Known RBP	4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	PSG7	Q13046	419 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	GRK1	Q15835	563 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	SAMD13	Q5VXD3	122 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	GLT8D1	Q68CQ7	371 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZFP1	Q6P2D0	407 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	WDR86	Q86TI4	376 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	FAM24B	Q8N5W8	94 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	OR4A5	Q8NH83	315 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	SLC25A46	Q96AG3	418 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZNF285	Q96NJ3	590 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	KRTAP9-9	Q9BYP9	154 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	COQ4	Q9Y3A0	265 aa		4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	MRPS16	Q9Y3D3	137 aa	Known RBP	4.57	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZNF207	O43670	478 aa	Known RBP	4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	CD7	P09564	240 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	OR10J4	P0C629	311 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	PTHLH	P12272	177 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	CPM	P14384	443 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	DAP	P51397	102 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	NCALD	P61601	193 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	RBX1	P62877	108 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	ELF3	P78545	371 aa	Predicted RBP	4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	KLHL12	Q53G59	568 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	MKX	Q8IYA7	352 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZNF664	Q8N3J9	261 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	CIRBP-AS1	Q8TBR5	109 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	MAL2	Q969L2	176 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	SHANK2-AS3	Q9BTD1	123 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZNF286A	Q9HBT8	521 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZNF355P	Q9NSJ1	428 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	OR52A1	Q9UKL2	312 aa		4.56	□□□□□ -1.68
LRCH3-215	ENST00000476664	IGHV3-21	A0A0B4J1V1	117 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	LEUTX	A8MZ59	168 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	COX7A2L	O14548	114 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	LY6H	O94772	140 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	GYPC	P04921	128 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	LGALS1	P09382	135 aa	Known RBP	4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	RBP1	P09455	135 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	PPIB	P23284	216 aa	Known RBP	4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	PPP1CC	P36873	323 aa	Known RBP	4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	MUC7	Q8TAX7	377 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	DNAJC30	Q96LL9	226 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	KRTAP4-5	Q9BYR2	181 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	TMEM222	Q9H0R3	208 aa		4.55	□□□□□ -1.68
LRCH3-215	ENST00000476664	TRBV6-6	A0A0A6YYG2	114 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	SLC17A3	O00476	420 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	PHOX2A	O14813	284 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	ZNF682	O95780	498 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	OR5AC1	P0C628	307 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	ATP6V0C	P27449	155 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	PEBP1	P30086	187 aa	Known RBP	4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	RPS10	P46783	165 aa	Known RBP	4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	DEFA1	P59665	94 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	TPI1	P60174	286 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	MAX	P61244	160 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	FGF12	P61328	243 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	SURF2	Q15527	256 aa	Predicted RBP	4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	TAF9	Q16594	264 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	CCDC58	Q4VC31	144 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664		Q6ZS49	121 aa		4.54	□□□□□ -1.68
LRCH3-215	ENST00000476664	KRTAP7-1	Q8IUC3	87 aa		4.54	□□□□□ -1.68

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