RNA–Protein interactions for RNA: ENST00000474643.5

VARS-223, Transcript of valyl-tRNA synthetase, human

TSL 5

Gene VARS, Length 885 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VARS-223	ENST00000474643	TP53TG1	Q9Y2A0	90 aa		11.23	□□□□□ -0.61
VARS-223	ENST00000474643		H0YIZ8	118 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	APOH	P02749	345 aa	Predicted RBP	11.22	□□□□□ -0.61
VARS-223	ENST00000474643	CD5	P06127	495 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	HNRNPC	P07910	306 aa	Known RBP eCLIP	11.22	□□□□□ -0.61
VARS-223	ENST00000474643	PSG1	P11464	419 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	OR2F1	Q13607	317 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	ODF3L2	Q3SX64	289 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	ACOT7L	Q6ZUV0	252 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	AKAP14	Q86UN6	197 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	GBGT1	Q8N5D6	347 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	OR10P1	Q8NGE3	313 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	OR51G1	Q8NGK1	321 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	SACS	Q9NZJ4	4579 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	RABAC1	Q9UI14	185 aa		11.22	□□□□□ -0.61
VARS-223	ENST00000474643	NUPR2	A6NF83	97 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	PRSS46	E5RG02	174 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	CCNK	O75909	580 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	CRYBB3	P26998	211 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	EIF2B2	P49770	351 aa	Known RBP	11.21	□□□□□ -0.61
VARS-223	ENST00000474643	SULT1A1	P50225	295 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	CAV2	P51636	162 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	LYZ	P61626	148 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	HBG1	P69891	147 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	HBG2	P69892	147 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	ZNF90	Q03938	601 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	LRRC37A5P	Q49AS3	106 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	STX12	Q86Y82	276 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	WFDC3	Q8IUB2	231 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	APRG1	Q8IVJ8	170 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	ST6GAL2	Q96JF0	529 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	TRGV9	Q99603	122 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	VSIR	Q9H7M9	311 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643	PFDN2	Q9UHV9	154 aa		11.21	□□□□□ -0.61
VARS-223	ENST00000474643		A0A1B0GVG6	124 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	PMS2P5	A8MQ11	134 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	HMSD	A8MTL9	139 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	DFFB	O76075	338 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	S100A11	P31949	105 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	USF2	Q15853	346 aa	Predicted RBP	11.2	□□□□□ -0.62
VARS-223	ENST00000474643	ATP6V1F	Q16864	119 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	TMEM252	Q8N6L7	170 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	PPP1R14B	Q96C90	147 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	RNF125	Q96EQ8	232 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	OR5AC2	Q9NZP5	309 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	MBD2	Q9UBB5	411 aa		11.2	□□□□□ -0.62
VARS-223	ENST00000474643	IGKV1D-37	A0A075B6S9	117 aa		11.19	□□□□□ -0.62
VARS-223	ENST00000474643		G3V3Q6	166 aa		11.19	□□□□□ -0.62
VARS-223	ENST00000474643	NUP62	P37198	522 aa	Predicted RBP	11.19	□□□□□ -0.62
VARS-223	ENST00000474643	DLK1	P80370	383 aa		11.19	□□□□□ -0.62
VARS-223	ENST00000474643	THAP8	Q8NA92	274 aa		11.19	□□□□□ -0.62
VARS-223	ENST00000474643	STXBP6	Q8NFX7	210 aa		11.19	□□□□□ -0.62
VARS-223	ENST00000474643	AQP10	Q96PS8	301 aa		11.19	□□□□□ -0.62
VARS-223	ENST00000474643	KLK5	Q9Y337	293 aa	Predicted RBP	11.19	□□□□□ -0.62
VARS-223	ENST00000474643	RYR2	Q92736	4967 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	hCG_2014768	A0A024R1R8	64 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	LY6G6C	O95867	125 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	CFD	P00746	253 aa	Predicted RBP	11.18	□□□□□ -0.62
VARS-223	ENST00000474643	RPL12	P30050	165 aa	Known RBP	11.18	□□□□□ -0.62
VARS-223	ENST00000474643	FAM90A2P	Q658T7	463 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	TMEM144	Q7Z5S9	345 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	ZNF546	Q86UE3	836 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	LILRB2	Q8N423	598 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	INO80E	Q8NBZ0	244 aa	Predicted RBP	11.18	□□□□□ -0.62
VARS-223	ENST00000474643	BPIFC	Q8NFQ6	507 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	RNF183	Q96D59	192 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	CSTL1	Q9H114	145 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	MAP6D1	Q9H9H5	199 aa		11.18	□□□□□ -0.62
VARS-223	ENST00000474643	IGKV1OR2-108	A0A075B7D4	117 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	HELT	A6NFD8	242 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	FAM24A	A6NFZ4	105 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	CST7	O76096	145 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	CA1	P00915	261 aa	Predicted RBP	11.17	□□□□□ -0.62
VARS-223	ENST00000474643	VWC2	Q2TAL6	325 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643		Q5BKY6	102 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	MS4A6A	Q9H2W1	248 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	NPVF	Q9HCQ7	196 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	TNFSF18	Q9UNG2	199 aa		11.17	□□□□□ -0.62
VARS-223	ENST00000474643	DNAH1	Q9P2D7	4330 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	IGSF23	A1L1A6	192 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	C1QB	P02746	253 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	S100A7	P31151	101 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	AP2S1	P53680	142 aa	Predicted RBP	11.16	□□□□□ -0.62
VARS-223	ENST00000474643	EWSR1	Q01844	656 aa	Known RBP eCLIP	11.16	□□□□□ -0.62
VARS-223	ENST00000474643	SLC38A11	Q08AI6	406 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	ZNF345	Q14585	488 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	ZNF124	Q15973	351 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	C16orf54	Q6UWD8	224 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	CYP2G1P	Q6ZSU1	146 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	STH	Q8IWL8	128 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	HYLS1	Q96M11	299 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	RARRES2	Q99969	163 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	HSPB11	Q9Y547	144 aa		11.16	□□□□□ -0.62
VARS-223	ENST00000474643	ORM2	P19652	201 aa		11.15	□□□□□ -0.62
VARS-223	ENST00000474643	GATA2	P23769	480 aa	Predicted RBP	11.15	□□□□□ -0.62
VARS-223	ENST00000474643	TEPP	Q6URK8	271 aa		11.15	□□□□□ -0.62
VARS-223	ENST00000474643	SIGLEC15	Q6ZMC9	328 aa		11.15	□□□□□ -0.62
VARS-223	ENST00000474643	OR1B1	Q8NGR6	318 aa		11.15	□□□□□ -0.62
VARS-223	ENST00000474643	GATAD1	Q8WUU5	269 aa		11.15	□□□□□ -0.62
VARS-223	ENST00000474643	TMEM147	Q9BVK8	224 aa		11.15	□□□□□ -0.62

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