RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 IMUPQ9GZP8 106 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 SS18L1O75177 396 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 DUSP14O95147 198 aaKnown RBP4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 NXPH3O95157 252 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 FAM78AQ5JUQ0 283 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 AAED1Q7RTV5 226 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 ATP5L2Q7Z4Y8 100 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 OR51H1Q8NH63 302 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 OSR1Q8TAX0 266 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 SPACA5Q96QH8 159 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 PRSS27Q9BQR3 290 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 PAXXQ9BUH6 204 aa4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 NSD1Q96L73 2696 aaPredicted RBP4.78□□□□□ -1.64
SMARCE1-208ENST00000474246 TRBV7-6A0A0J9YX20 115 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 SNURFLB1AK76 121 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 M0R2P5 195 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 ANGPTL7O43827 346 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 RBMY1CP0DJD4 496 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 IGHV4-31P0DP07 118 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 RPL34P49207 117 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 NSUN5P1Q3KNT7 163 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF57Q68EA5 555 aaPredicted RBP4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 MAPKAPK5-AS1Q8N8E1 139 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 VSTM2AQ8TAG5 236 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 APOBEC4Q8WW27 367 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 S100A16Q96FQ6 103 aaKnown RBP4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 ZC2HC1AQ96GY0 325 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 DEPPQ9NTK1 212 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 C19orf25Q9UFG5 118 aaPredicted RBP4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 ANAPC10Q9UM13 185 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 V9GYH0 126 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 ANK2Q01484 3957 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 CROCCQ5TZA2 2017 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 NUP210LQ5VU65 1888 aa4.77□□□□□ -1.65
SMARCE1-208ENST00000474246 MYLKQ15746 1914 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 A0A0J9YW62 118 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 INAFM1C9JVW0 142 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 H3BRM9 83 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 PLA2G10O15496 165 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 LYRM1O43325 122 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 JTBO76095 146 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 TRGC2P03986 189 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 CRYGAP11844 174 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 SDC2P34741 201 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 CST6Q15828 149 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 Q56UQ5 140 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 LCE1DQ5T752 114 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 ATP1A1-AS1Q5TC04 95 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 FAM222AQ5U5X8 452 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF880Q6PDB4 577 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 SLC25A34Q6PIV7 304 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 MSRB3Q8IXL7 192 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 C1orf174Q8IYL3 243 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 SCGB1C1Q8TD33 95 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 IGFBPL1Q8WX77 278 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 CCL17Q92583 94 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 RARRES3Q9UL19 164 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 RYR1P21817 5038 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 ZFC3H1O60293 1989 aaKnown RBP4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 TRGV11A0A075B6L2 103 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 TRBV20-1A0A075B6N2 111 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 LOC100131303A0A0U1RQF7 123 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 C3orf85A0A1B0GTC6 90 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 A8MWV9 139 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 NDUFS5O43920 106 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 PITX3O75364 302 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 NDUFB6O95139 128 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 GYPAP02724 150 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 ASIPP42127 132 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 CA7P43166 264 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 RPS23P62266 143 aaKnown RBP4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 CACNG7P62955 275 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 ELOCQ15369 112 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 SP6Q3SY56 376 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF260Q3ZCT1 412 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 SPATA45Q537H7 98 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 MRPL2Q5T653 305 aaKnown RBP4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 C22orf39Q6P5X5 142 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 FAM168AQ92567 244 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 TBL1YQ9BQ87 522 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 DEFB127Q9H1M4 99 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 VSIG4Q9Y279 399 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 KCNE3Q9Y6H6 103 aa4.76□□□□□ -1.65
SMARCE1-208ENST00000474246 MXRA5Q9NR99 2828 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF503-AS2A6NEH8 195 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 ZNF727A8MUV8 499 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 APOC4-APOC2K7ER74 178 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 XKRYO14609 159 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 TIMM23O14925 209 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 SOCS1O15524 211 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 SNCGO76070 127 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 PMS2P2O95744 297 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 APOC2P02655 101 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 PYYP10082 97 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 FOLR3P41439 243 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 SRSF9Q13242 221 aaKnown RBP eCLIP4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 VN1R4Q7Z5H5 301 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 TRAPPC6BQ86SZ2 158 aa4.75□□□□□ -1.65
SMARCE1-208ENST00000474246 SLC22A24Q8N4F4 322 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms