RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 FAM78BQ5VT40 261 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 SPATA31B1PQ5VZV4 182 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 AMTNQ6UX39 209 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 SSX7Q7RTT5 188 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 OR51G1Q8NGK1 321 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 COQ8AQ8NI60 647 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 RNASEH2CQ8TDP1 164 aaKnown RBP3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 GPX8Q8TED1 209 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 TMEM170AQ8WVE7 144 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 FCGR1BQ92637 280 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 GPR146Q96CH1 333 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 RNF125Q96EQ8 232 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 S100A16Q96FQ6 103 aaKnown RBP3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 IGF2BP2-AS1Q96M15 143 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 C7orf50Q9BRJ6 194 aaKnown RBP3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 Q9H3A6 140 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 ENY2Q9NPA8 101 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 KLK11Q9UBX7 282 aa3.57□□□□□ -1.84
SNRNP40-204ENST00000474025 C3orf85A0A1B0GTC6 90 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 PLAC8L1A1L4L8 177 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ZNF705GA8MUZ8 300 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 F5H768 121 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 M0QYG6 137 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ISLRO14498 428 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ATG12O94817 140 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 DEFB130BP0DP73 79 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 DEFB130AP0DP74 79 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 PGAM2P15259 253 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ELK1P19419 428 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 HOXA5P20719 270 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 UCP1P25874 307 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 TSPOP30536 169 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 RCVRNP35243 200 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 NUP62P37198 522 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ID1P41134 155 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 XGP55808 180 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 PIGPP57054 158 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 SP6Q3SY56 376 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 C2orf83Q53S99 150 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 Q5VSD8 79 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 OR8G2PQ6IF36 304 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 EBLN2Q6P2I7 272 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 IZUMO2Q6UXV1 221 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 LHFPL1Q86WI0 220 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 LYPD1Q8N2G4 141 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 SAMD12Q8N8I0 201 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 SLC24A4Q8NFF2 622 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 OR52E5Q8NH55 327 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 NPIPB3Q92617 1050 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 RRNAD1Q96FB5 475 aaKnown RBP3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ZNF486Q96H40 463 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ACY3Q96HD9 319 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 C20orf173Q96LM9 149 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 TMEM208Q9BTX3 173 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 PBDC1Q9BVG4 233 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 KRTAP9-3Q9BYQ3 159 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 MAGT1Q9H0U3 335 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 Q9H8V8 135 aa3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 HEYLQ9NQ87 328 aaPredicted RBP3.56□□□□□ -1.84
SNRNP40-204ENST00000474025 ANKRD65E5RJM6 399 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 M0R2Z0 102 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 CRXO43186 299 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 INSP01308 110 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 ATP5G1P05496 136 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 AZU1P20160 251 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 TGFBR1P36897 503 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 ATP5G3P48201 142 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 SUPT4H1P63272 117 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 ZNF90Q03938 601 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 CLINT1Q14677 625 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 FCN2Q15485 313 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 TRIM16LQ309B1 348 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 C1orf194Q5T5A4 169 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 ETFRF1Q6IPR1 90 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 Q6ZRN7 208 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 CROCCP3Q8IVE0 287 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 BAP18Q8IXM2 172 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 OR11H7Q8NGC8 314 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 OR4C16Q8NGL9 310 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 RNASE11Q8TAA1 199 aaKnown RBP3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 LHFPL5Q8TAF8 219 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 ABHD1Q96SE0 405 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 UPK3BQ9BT76 320 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 RPRMQ9NS64 109 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 DOK5Q9P104 306 aa3.55□□□□□ -1.84
SNRNP40-204ENST00000474025 IGKV1D-37A0A075B6S9 117 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 A0A1W2PPQ1 181 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 CBY3A6NI87 242 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 CEBPZOSA8MTT3 80 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 CDS2O95674 445 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 SCGB1D1O95968 90 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 FUSP35637 526 aaKnown RBP eCLIP3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 MEOX2P50222 304 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 CNN1P51911 297 aaKnown RBP3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 LINC00315P59091 139 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 LYZP61626 148 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 B2MP61769 119 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 DLK1P80370 383 aa3.54□□□□□ -1.84
SNRNP40-204ENST00000474025 SPINK13Q1W4C9 94 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms