RNA–Protein interactions for RNA: ENST00000471439.1

VPS13A-210, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 510 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-210ENST00000471439 OR1Q1Q15612 314 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 PRSS8Q16651 343 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 TDRG1Q3Y452 100 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 DNLZQ5SXM8 178 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 PLCXD3Q63HM9 321 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 ELP2Q6IA86 826 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 FAM24BQ8N5W8 94 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 SLC35B4Q969S0 331 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 SPTSSAQ969W0 71 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 SCGB3A2Q96PL1 93 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 RSG1Q9BU20 258 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 ARMC7Q9H6L4 198 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 ABCB9Q9NP78 766 aa2.03□□□□□ -2.08
VPS13A-210ENST00000471439 A0A096LPF7 62 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 FAM223BA6NKX1 122 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 K7EP13 123 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 MPDU1O75352 247 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 CST4P01036 141 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 IL4P05112 153 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 CRYGDP07320 174 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 TSPAN19P0C672 248 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 EVI2AP22794 236 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 HAAOP46952 286 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 UBE2KP61086 200 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 RAB11AP62491 216 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 RAB11BQ15907 218 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 CEACAM21Q3KPI0 293 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 TEX30Q5JUR7 227 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 DRAM2Q6UX65 266 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 TMED4Q7Z7H5 227 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 FAM223AQ8IWN6 122 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 LINC00311Q8N616 119 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 INO80EQ8NBZ0 244 aaPredicted RBP2.02□□□□□ -2.09
VPS13A-210ENST00000471439 PROKR2Q8NFJ6 384 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 LINC00467Q9BRT7 94 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 MCUBQ9NWR8 336 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 BABAM2Q9NXR7 383 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 C21orf62Q9NYP8 219 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 ZNF257Q9Y2Q1 563 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 UFC1Q9Y3C8 167 aa2.02□□□□□ -2.09
VPS13A-210ENST00000471439 IGHV3-49A0A0A0MS15 119 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 OR2T8A6NH00 312 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 J3QT63 122 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 ZNF701M0R085 212 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-210ENST00000471439 RAB5AP20339 215 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 M6PRP20645 277 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 IL3RAP26951 378 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 KISS1Q15726 138 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 ACTL10Q5JWF8 245 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 OR2T5Q6IEZ7 315 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 TTC33Q6PID6 262 aaPredicted RBP2.01□□□□□ -2.09
VPS13A-210ENST00000471439 WFDC10BQ8IUB3 73 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 KRTCAP2Q8N6L1 136 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 ZNF439Q8NDP4 499 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 OR4A15Q8NGL6 344 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 OR2T29Q8NH02 315 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 FAM19A4Q96LR4 140 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 RETNLBQ9BQ08 111 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 AGMATQ9BSE5 352 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 EXOSC4Q9NPD3 245 aaKnown RBP2.01□□□□□ -2.09
VPS13A-210ENST00000471439 C1orf109Q9NX04 203 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 CBY1Q9Y3M2 126 aa2.01□□□□□ -2.09
VPS13A-210ENST00000471439 FUOMA2VDF0 154 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 SMIM23A6NLE4 172 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 SMIM24O75264 130 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 KLHL2O95198 593 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 CPSF4O95639 269 aaKnown RBP2□□□□□ -2.09
VPS13A-210ENST00000471439 MT-ND4P03905 459 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 CRABP2P29373 138 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 TGFBR1P36897 503 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 ZNF137PP52743 207 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 OR2B8PP59922 312 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 NCALDP61601 193 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 RPL38P63173 70 aaKnown RBP2□□□□□ -2.09
VPS13A-210ENST00000471439 SNCBQ16143 134 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 C6orf99Q4VX62 202 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 TMEM236Q5W0B7 351 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 MIR7-3HGQ8N6C7 128 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 NATD1Q8N6N6 113 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 SPANXA2-OT1Q8N9U9 137 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 OR5A2Q8NGI9 324 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 BAALCQ8WXS3 180 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 ISOC2Q96AB3 205 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 SULT4A1Q9BR01 284 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 LINC00574Q9H8X3 128 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 RPRD1BQ9NQG5 326 aaKnown RBP2□□□□□ -2.09
VPS13A-210ENST00000471439 METTL1Q9UBP6 276 aaKnown RBP2□□□□□ -2.09
VPS13A-210ENST00000471439 CYB5R1Q9UHQ9 305 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 ENOPH1Q9UHY7 261 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 URGCP-MRPS24S4R325 110 aa2□□□□□ -2.09
VPS13A-210ENST00000471439 A8MT66 165 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 H3BNG1 76 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 M0R1X1 148 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 CHP2O43745 196 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 PITX3O75364 302 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 PRM2P04554 102 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 IL6P05231 212 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 MYL9P24844 172 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 PAFAH1B2P68402 229 aa1.99□□□□□ -2.09
VPS13A-210ENST00000471439 MESTQ5EB52 335 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms