RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 TRAV2A0A0B4J234 112 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 AGPAT2O15120 278 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 CMC4P56277 68 aaPredicted RBP10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 EWSR1Q01844 656 aaKnown RBP eCLIP10.82□□□□□ -0.683e-8■■■□□ 18.8
SQSTM1-205ENST00000464493 RAB31Q13636 194 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 VWC2Q2TAL6 325 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 STPG3Q8N7X2 389 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 OR1B1Q8NGR6 318 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 ASCL2Q99929 193 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 TMEM147Q9BVK8 224 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 SLC45A2Q9UMX9 530 aa10.82□□□□□ -0.68
SQSTM1-205ENST00000464493 LINC00869P0C866 280 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 NHLRC4P0CG21 123 aaPredicted RBP10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 S100A7P31151 101 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 BAXQ07812 192 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 ODF3L2Q3SX64 289 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 C1orf194Q5T5A4 169 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 SIGLEC15Q6ZMC9 328 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 ZNF546Q86UE3 836 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 SBSPONQ8IVN8 264 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 STXBP6Q8NFX7 210 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 MGST2Q99735 147 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 FAM110AQ9BQ89 295 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 SRD5A3Q9H8P0 318 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 DOK5Q9P104 306 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 MBD2Q9UBB5 411 aa10.81□□□□□ -0.68
SQSTM1-205ENST00000464493 UBE2L5PA0A1B0GUS4 154 aa10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 RBMY1BA6NDE4 496 aaKnown RBP10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 RBMY1EA6NEQ0 496 aaKnown RBP10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 HYPMO75409 117 aa10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 RBMY1DP0C7P1 496 aaKnown RBP10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 CAMLGP49069 296 aa10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 PLP1P60201 277 aa10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 OR5C1Q8NGR4 320 aa10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 THAP6Q8TBB0 222 aa10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 WDR83OSQ9Y284 106 aa10.8□□□□□ -0.68
SQSTM1-205ENST00000464493 ZNF98A6NK75 572 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 K7EQG2 157 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 LYL1P12980 280 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 RAP2BP61225 183 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 PXDC1Q5TGL8 231 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 LINC00322Q6ZN03 302 aaPredicted RBP10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 OR8I2Q8N0Y5 310 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 DCANP1Q8TF63 244 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 ASB13Q8WXK3 278 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 CITED4Q96RK1 184 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 ARL6Q9H0F7 186 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 FBXL17Q9UF56 701 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 HIGD1AQ9Y241 93 aa10.79□□□□□ -0.68
SQSTM1-205ENST00000464493 GIPP09681 153 aaPredicted RBP10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 OR5G3P0C626 314 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 RPL12P30050 165 aaKnown RBP10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 FGL1Q08830 312 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 CLINT1Q14677 625 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 HAGHQ16775 308 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 S100A7AQ86SG5 101 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 APRG1Q8IVJ8 170 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 FAM24BQ8N5W8 94 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 SLC25A39Q9BZJ4 359 aaPredicted RBP10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 SLC25A22Q9H936 323 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 MAP6D1Q9H9H5 199 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 NRN1Q9NPD7 142 aa10.78□□□□□ -0.68
SQSTM1-205ENST00000464493 LOC102724200A0A096LPH7 203 aaPredicted RBP10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 MPDU1O75352 247 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 FGF7P21781 194 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 PATE2Q6UY27 113 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 Q6ZRG5 221 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 CHAC2Q8WUX2 184 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 SHANK2-AS3Q9BTD1 123 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 GGTLC1Q9BX51 225 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 ARV1Q9H2C2 271 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 HSPB11Q9Y547 144 aa10.77□□□□□ -0.69
SQSTM1-205ENST00000464493 H3BRN7 92 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 GALR1P47211 349 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 RPL29P47914 159 aaKnown RBP10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 DEFB131AP59861 70 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 PRR20EP86478 221 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 PRR20CP86479 221 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 PRR20DP86480 221 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 PRR20BP86481 221 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 PRR20AP86496 221 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 OPCMLQ14982 345 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 ZNF124Q15973 351 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 MIC13Q5XKP0 118 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 LEMD1Q68G75 181 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 UHRF2Q96PU4 802 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 SCRT1Q9BWW7 348 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 SLC25A32Q9H2D1 315 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 ZMAT4Q9H898 229 aa10.76□□□□□ -0.69
SQSTM1-205ENST00000464493 NBEAL2Q6ZNJ1 2754 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 ELOA3CA0A087WX78 387 aaPredicted RBP10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 COX7A2P2O60397 106 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 ZNF688P0C7X2 276 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 B2MP61769 119 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 SNRPD3P62318 126 aaKnown RBP10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 Q5BKY6 102 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 TMEM37Q8WXS4 190 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 GPR82Q96P67 336 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 ATP5SQ99766 215 aa10.75□□□□□ -0.69
SQSTM1-205ENST00000464493 TM2D3Q9BRN9 247 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms