RNA–Protein interactions for RNA: ENST00000461612.1

PRPF4B-202, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 629 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-202ENST00000461612 GUCA2BQ16661 112 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 RPL39P5Q59GN2 51 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 C1orf100Q5SVJ3 147 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 KRTAP5-1Q6L8H4 278 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 ZNF880Q6PDB4 577 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 IL34Q6ZMJ4 242 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 LINC00322Q6ZN03 302 aaPredicted RBP2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 Q6ZVH6 145 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 CBR4Q8N4T8 237 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 NECAP1Q8NC96 275 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 OR10J5Q8NHC4 309 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 GRPEL2Q8TAA5 225 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 VSTM2AQ8TAG5 236 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 CHCHD10Q8WYQ3 142 aaPredicted RBP2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 AGMATQ9BSE5 352 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 FAM103A1Q9BTL3 118 aaKnown RBP2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 FAAP24Q9BTP7 215 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 C20orf85Q9H1P6 137 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 IFI27L2Q9H2X8 130 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 TP53TG1Q9Y2A0 90 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 PRELID3BQ9Y3B1 194 aa2.88□□□□□ -1.95
PRPF4B-202ENST00000461612 TRAV8-7A0A075B6U6 113 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 TRBV7-1A0A0A6YYK4 115 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 A0A0J9YXY3 114 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 M0R1X1 148 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 ARL6IP5O75915 188 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 NAPSAO96009 420 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 IFNA4P05014 189 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 CD3GP09693 182 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 CTXN2P0C2S0 81 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 DEFA4P12838 97 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 GADD45AP24522 165 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 PSMA1P25786 263 aaKnown RBP2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 MAS1LP35410 378 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 RORCP51449 518 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 UBE2KP61086 200 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 HLA-DRB3P79483 266 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 TNFRSF9Q07011 255 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 ST3GAL4Q11206 333 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 TRAM1Q15629 374 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 TNXAQ16473 311 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 DEFB114Q30KQ6 69 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 ACSM3Q53FZ2 586 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 LAMTOR1Q6IAA8 161 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 CEMP1Q6PRD7 247 aaPredicted RBP2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 C6orf201Q7Z4U5 140 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 GPHB5Q86YW7 130 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 TTC9CQ8N5M4 171 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 CASTOR1Q8WTX7 329 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 PYDC1Q8WXC3 89 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 EEF1AKMT3Q96AZ1 226 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 TMEM101Q96IK0 257 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 ABHD14BQ96IU4 210 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 DERL3Q96Q80 235 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 SDHCQ99643 169 aaPredicted RBP2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 CMSS1Q9BQ75 279 aaKnown RBP2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 GINS4Q9BRT9 223 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 DCUN1D5Q9BTE7 237 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 GGTLC1Q9BX51 225 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 C12orf4Q9NQ89 552 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 MRPL27Q9P0M9 148 aaKnown RBP2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 ZNF257Q9Y2Q1 563 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 COL7A1Q02388 2944 aa2.87□□□□□ -1.95
PRPF4B-202ENST00000461612 KIR2DL5BA0A0G2JN68 375 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 KIR2DL5BA0A0G2JPC4 375 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 F6UB75 175 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 BET1O15155 118 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 FABP7O15540 132 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 MPDU1O75352 247 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 HRASP01112 189 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 IGKV1-16P04430 117 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 CD5P06127 495 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 SCTP09683 121 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 CD36P16671 472 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 CTRB1P17538 263 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 CBLN1P23435 193 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 TALDO1P37837 337 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 TAS2R19P59542 299 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 ARPC4P59998 168 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 RPS11P62280 158 aaKnown RBP eCLIP2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 RHOGP84095 191 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 CDK10Q15131 360 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 PRSS8Q16651 343 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 HSD17B12Q53GQ0 312 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 RBM48Q5RL73 367 aaKnown RBP2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 LGALS9CQ6DKI2 356 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 CTRB2Q6GPI1 263 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 C8orf59Q8N0T1 100 aaPredicted RBP2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 KIR2DL5AQ8N109 375 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 DEFB125Q8N687 156 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 PACRGLQ8N7B6 248 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 OR10R2Q8NGX6 335 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 KIR2DL5BQ8NHK3 375 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 CYGBQ8WWM9 190 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 SRSF12Q8WXF0 261 aaKnown RBP2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 ACOT12Q8WYK0 555 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 PGLYRP3Q96LB9 341 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 MND1Q9BWT6 205 aa2.86□□□□□ -1.95
PRPF4B-202ENST00000461612 HINT2Q9BX68 163 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms