RNA–Protein interactions for RNA: ENST00000452448.6

EPHA3-202, Transcript of EPH receptor A3, humanhuman

TSL 1 (best) BASIC

Gene EPHA3, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3-202ENST00000452448 HLA-DRB4X5D2U9 266 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 DSPPQ9NZW4 1301 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 IGLV3-16A0A075B6K0 115 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 TRAV8-1A0A0A6YYK1 113 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 TRIAP1O43715 76 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 NXPH3O95157 252 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 CPSF4O95639 269 aaKnown RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 ASAH2BP0C7U1 165 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 RPL23P62829 140 aaKnown RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 LOXL1Q08397 574 aaPredicted RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 EBLN2Q6P2I7 272 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 CXCL17Q6UXB2 119 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 Q6ZRU5 148 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 TSACCQ96A04 125 aaPredicted RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 SMIM7Q9BQ49 75 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 AAMDCQ9H7C9 122 aa3.95□□□□□ -1.78
EPHA3-202ENST00000452448 KLF13Q9Y2Y9 288 aaPredicted RBP3.95□□□□□ -1.78
EPHA3-202ENST00000452448 CACNA1AO00555 2505 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 MDFIC2A0A1B0GVS7 189 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 hADV29S1A0JD25 119 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 SMKR1H3BMG3 65 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 NDUFB2O95178 105 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 TCL1BO95988 128 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 IGHG1P01857 330 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 P0DMU3 169 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 FAM231AP0DMU4 169 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 FAM231CP0DMU5 169 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 SMIM11AP58511 58 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 ERVK-16P61578 105 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 MSMPQ1L6U9 139 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 CLLU1OSQ5K130 101 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 CEND1Q8N111 149 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 SPATA3Q8NHX4 192 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 TSKUQ8WUA8 353 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 TMEM255BQ8WV15 326 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 C17orf77Q96MU5 243 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 ATG2BQ96BY7 2078 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 TDRD15B5MCY1 1934 aaKnown RBP3.94□□□□□ -1.78
EPHA3-202ENST00000452448 MYO16Q9Y6X6 1858 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 KIAA1549Q9HCM3 1950 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 PIEZO1Q92508 2521 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 TRAV8-2A0A0B4J237 113 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 C8orf87E5RJ46 101 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 TMEM187Q14656 261 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 NUMA1Q14980 2115 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF726P1Q15940 193 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 CCL14Q16627 93 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 SMIM14Q96QK8 99 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 AICDAQ9GZX7 198 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 GNG13Q9P2W3 67 aa3.94□□□□□ -1.78
EPHA3-202ENST00000452448 DOCK4Q8N1I0 1966 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 PLAC8L1A1L4L8 177 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 IGLL5B9A064 214 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 PLA2G1BP04054 148 aaKnown RBP3.93□□□□□ -1.78
EPHA3-202ENST00000452448 CRYGSP22914 178 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 MPV17P39210 176 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 CRYBA2P53672 197 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 SLC25A30Q5SVS4 291 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 C12orf73Q69YU5 71 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 AMN1Q8IY45 258 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 CLECL1Q8IZS7 167 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF689Q96CS4 500 aaPredicted RBP3.93□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF799Q96GE5 643 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF256Q9Y2P7 627 aaPredicted RBP3.93□□□□□ -1.78
EPHA3-202ENST00000452448 TRAV12-2A0A075B6T6 113 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 C2orf70A6NJV1 201 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 H3BP45 60 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 K7EM74 188 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 K7ESM1 405 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 COX6A1P12074 109 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 SUB1P53999 127 aaKnown RBP eCLIP3.93□□□□□ -1.78
EPHA3-202ENST00000452448 HBG1P69891 147 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 RPL18AQ02543 176 aaKnown RBP3.93□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF791Q3KP31 576 aaPredicted RBP3.93□□□□□ -1.78
EPHA3-202ENST00000452448 SP5Q6BEB4 398 aaPredicted RBP3.93□□□□□ -1.78
EPHA3-202ENST00000452448 PCSK4Q6UW60 755 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 ATP5L2Q7Z4Y8 100 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 RNF182Q8N6D2 247 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 FAM57AQ8TBR7 257 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 OR2A5Q96R48 311 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 PLEKHA3Q9HB20 300 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 FANCMQ8IYD8 2048 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 LTBP2Q14767 1821 aa3.93□□□□□ -1.78
EPHA3-202ENST00000452448 TRAV2A0A0B4J234 112 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 TRAV1-2A0A0B4J238 106 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 TRBV7-7A0A0K0K1E9 115 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 BMPR1BO00238 502 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 EPPINO95925 133 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 IGKCP01834 107 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 ZNF20P17024 532 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 DSCR4P56555 118 aaPredicted RBP3.92□□□□□ -1.78
EPHA3-202ENST00000452448 CDK5R1Q15078 307 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 RSPO1Q2MKA7 263 aaPredicted RBP3.92□□□□□ -1.78
EPHA3-202ENST00000452448 PRR15Q8IV56 129 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 FBXL14Q8N1E6 418 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 PHLDA1Q8WV24 401 aaPredicted RBP3.92□□□□□ -1.78
EPHA3-202ENST00000452448 OCIAD1Q9NX40 245 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 C19orf25Q9UFG5 118 aaPredicted RBP3.92□□□□□ -1.78
EPHA3-202ENST00000452448 ZFP92A6NM28 416 aa3.92□□□□□ -1.78
EPHA3-202ENST00000452448 K7ERJ3 54 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms