RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 ACP1P24666 158 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 EDDM3BP56851 147 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 PSG7Q13046 419 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 VWC2Q2TAL6 325 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 LINC01590Q5TEZ4 76 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 ZNF114Q8NC26 417 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 Q8TCH9 128 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 IL1F10Q8WWZ1 152 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 RASL11BQ9BPW5 248 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 HDHD3Q9BSH5 251 aaPredicted RBP2.3□□□□□ -2.04
LIG4-203ENST00000442234 FAM234AQ9H0X4 552 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 FZR1Q9UM11 496 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 OR2W1Q9Y3N9 320 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 R4GMQ9 66 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 ZANQ9Y493 2812 aa2.3□□□□□ -2.04
LIG4-203ENST00000442234 A8MWL6 223 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 A8MWV9 139 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TNFSF11O14788 317 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 LMX1BO60663 402 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TMEM50AO95807 157 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 OR2H2O95918 312 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 FRMD6-AS1P0C7T7 363 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 ZNF688P0C7X2 276 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 RPL31P62899 125 aaKnown RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 CX3CL1P78423 397 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 SRSF9Q13242 221 aaKnown RBP eCLIP2.29□□□□□ -2.04
LIG4-203ENST00000442234 DEFB134Q4QY38 66 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 NMSQ5H8A3 153 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 HLA-DQA1Q5Y7H0 255 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TBC1D26Q86UD7 250 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 LRRC25Q8N386 305 aaPredicted RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 KIR3DL3Q8N743 410 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 OR13A1Q8NGR1 328 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 OR52N5Q8NH56 324 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 PRSS3P2Q8NHM4 247 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 DLX4Q92988 240 aaPredicted RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 ABHD14BQ96IU4 210 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 Q96MF0 132 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 GPHA2Q96T91 129 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 HIST1H4GQ99525 98 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 FAM60AQ9NP50 221 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 CACNG5Q9UF02 275 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 IGHV3OR16-10A0A075B7F0 116 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 A0A0B4J2E0 115 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 A0A1B0GX12 115 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 C2orf70A6NJV1 201 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 VWC2LB2RUY7 222 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 DEFA4P12838 97 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 OPRK1P41145 380 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 REG1BP48304 166 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TBC1D28Q2M2D7 210 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 SLC25A53Q5H9E4 307 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TMEM211Q6ICI0 200 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 HRCT1Q6UXD1 115 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 PQLC2Q6ZP29 291 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 ZNF525Q8N782 197 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 OR1L1Q8NH94 360 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 CNRIP1Q96F85 164 aaPredicted RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 C18orf12Q96KH6 178 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TXNDC17Q9BRA2 123 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 RNASE7Q9H1E1 156 aaKnown RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 TMEM160Q9NX00 188 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 OTOGQ6ZRI0 2925 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 DMBT1Q9UGM3 2413 aaPredicted RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 TNCP24821 2201 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 PTPRDP23468 1912 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 C5orf49A4QMS7 147 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TMEM14DPA8MWL7 114 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 J3QLI3 93 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 RHODO00212 210 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 LY6HO94772 140 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 FCGR2AP12318 317 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 ZNF137PP52743 207 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TMEM78Q5T7P6 136 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 HIST2H2BDQ6DRA6 164 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 GAGE2AQ6NT46 116 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 RBPMS2Q6ZRY4 209 aaKnown RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 OR1L4Q8NGR5 311 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 ST8SIA1Q92185 356 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 H1FXQ92522 213 aaKnown RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 FLYWCH2Q96CP2 140 aaKnown RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 DUX3Q96PT4 197 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TMEM147Q9BVK8 224 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TMEM222Q9H0R3 208 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 CDIP1Q9H305 208 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 LINC00312Q9Y6C7 94 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 HEATR5BQ9P2D3 2071 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 FBN1P35555 2871 aaKnown RBP2.29□□□□□ -2.04
LIG4-203ENST00000442234 VPS13CQ709C8 3753 aa2.29□□□□□ -2.04
LIG4-203ENST00000442234 TRBV5-4A0A0C4DH59 114 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 TINCRA0A1B0GVN0 87 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 IGLV3-25P01717 112 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 ORM1P02763 201 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 ORM2P19652 201 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 EDN2P20800 178 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 FXYD2P54710 66 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 CENPWQ5EE01 88 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 KHDC1LQ5JSQ8 128 aa2.28□□□□□ -2.04
LIG4-203ENST00000442234 KLF17Q5JT82 389 aaPredicted RBP2.28□□□□□ -2.04
LIG4-203ENST00000442234 LCNL1Q6ZST4 164 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms