RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 SAP30O75446 220 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 FRMD6-AS1P0C7T7 363 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 KRTAP1-1Q07627 177 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 MRGPRG-AS1Q2M3A8 158 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 SLC25A48Q6ZT89 311 aaKnown RBP5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 ARPC1AQ92747 370 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 POLR3KQ9Y2Y1 108 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 IGKV3-7A0A075B6H7 116 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 FNDC10F2Z333 226 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 PDE6DO43924 150 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 ADIRFQ15847 76 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 CIB3Q96Q77 187 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 CITED2Q99967 270 aaPredicted RBP5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 NDUFAF3Q9BU61 184 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 ESM1Q9NQ30 184 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 LY96Q9Y6Y9 160 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 SVEP1Q4LDE5 3571 aa5.84□□□□□ -1.47
CDC42BPA-208ENST00000442054 A0A096LNT2 108 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 PGPEP1LA6NFU8 196 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 C11orf94C9JXX5 98 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 SOX15O60248 233 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 IFNA1P01562 189 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR10J4P0C629 311 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 S100A2P29034 98 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 TAS2R60P59551 318 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 MRAPQ8TCY5 172 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 RPUSD4Q96CM3 377 aaKnown RBP5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 PFDN5Q99471 154 aa5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 FOXA2Q9Y261 457 aaPredicted RBP5.84□□□□□ -1.48
CDC42BPA-208ENST00000442054 A0A1B0GV90 55 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 XKRY2A2RUG3 117 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 MPDU1O75352 247 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 PVRIGQ6DKI7 326 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 PDPNQ86YL7 162 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 TMEM256Q8N2U0 113 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR10P1Q8NGE3 313 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 PLEKHA3Q9HB20 300 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 ARL2-SNX15V9GYD0 113 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 HPRT1P00492 218 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 SNRPCP09234 159 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 CDC34P49427 236 aaPredicted RBP5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 ATP5G2Q06055 141 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 C5orf64Q2M2E5 130 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 SPINK9Q5DT21 86 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 SPATA31B1PQ5VZV4 182 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 MCRIP2Q9BUT9 160 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 V9GYV3 84 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 C15orf61A6NNL5 157 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 C9JCJ5 164 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 CA2P00918 260 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 DIAPH2-AS1Q14236 149 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 SFRP2Q96HF1 295 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGF2BP2-AS1Q96M15 143 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 TXNDC17Q9BRA2 123 aa5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 SEPSECSQ9HD40 501 aaKnown RBP5.83□□□□□ -1.48
CDC42BPA-208ENST00000442054 A0A087X0M5 115 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 A0A1B0GX30 115 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 CGB1A6NKQ9 187 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 EREGO14944 169 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 ARL14EPLP0DKL9 152 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 RPL8P62917 257 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 CX3CL1P78423 397 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 DEFA6Q01524 100 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 FAM106AQ4KMX7 169 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 LBHQ53QV2 105 aaPredicted RBP5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 HCP5Q6MZN7 132 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 TEX43Q6ZNM6 134 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 RBPMS2Q6ZRY4 209 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 NECAP1Q8NC96 275 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 OCC1Q8TAD7 63 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 DUX3Q96PT4 197 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 MEGF9Q9H1U4 602 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 FKBP11Q9NYL4 201 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 FUT9Q9Y231 359 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGHV3-35A0A0C4DH35 117 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 SCO2A0A1W2PP80 73 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 NDUFB4O95168 129 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 RAB4AP20338 218 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 Q6ZWC4 215 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 NABP2Q9BQ15 211 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 PRO1933Q9H354 126 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 LRBAP50851 2863 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 TRAV9-1A0A075B6T8 112 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 IGHV3-21A0A0B4J1V1 117 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 F6UZH7 168 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 INS-IGF2F8WCM5 200 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 H7BYZ3 331 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR2J3O76001 311 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 CD28P10747 220 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 ADMP35318 185 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 RPL29P47914 159 aaKnown RBP5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 C1orf194Q5T5A4 169 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 HIST2H2BDQ6DRA6 164 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 C8orf86Q6ZUL3 223 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 VKORC1L1Q8N0U8 176 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 OR1L8Q8NGR8 309 aa5.82□□□□□ -1.48
CDC42BPA-208ENST00000442054 BMI1P35226 326 aa5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 CNN1P51911 297 aaKnown RBP5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 ACOT6Q3I5F7 207 aaPredicted RBP5.81□□□□□ -1.48
CDC42BPA-208ENST00000442054 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms