RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 GPX7Q96SL4 187 aaPredicted RBP3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 SHANK2-AS3Q9BTD1 123 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 LIME1Q9H400 295 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 GNB4Q9HAV0 340 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 PCTPQ9UKL6 214 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 VSIG4Q9Y279 399 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 LSM2Q9Y333 95 aaKnown RBP3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 INSL5Q9Y5Q6 135 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 LCTP09848 1927 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 A0A0G2JMZ2 1700 aa3.7□□□□□ -1.82
HMGB3P9-201ENST00000441799 PLXNA1Q9UIW2 1896 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 A0A0A6YYD4 124 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 J3QT63 122 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 FCN1O00602 326 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 GPR137BO60478 399 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 RBP4P02753 201 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 CD3DP04234 171 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 COX7CP15954 63 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 PTGDSP41222 190 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 ECSCRQ19T08 205 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 TMEM30BQ3MIR4 351 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 NMSQ5H8A3 153 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 KCTD18Q6PI47 426 aaPredicted RBP3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 LY6G5BQ8NDX9 201 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 SMIM4Q8WVI0 70 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 GTSF1Q8WW33 167 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 COPS9Q8WXC6 57 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 AQP3Q92482 292 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 ZNF799Q96GE5 643 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 ZC2HC1AQ96GY0 325 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 PGLYRP2Q96PD5 576 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 TM2D3Q9BRN9 247 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 GABARAPL3Q9BY60 117 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 SRXN1Q9BYN0 137 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 SPRY4Q9C004 299 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 POLR2J2Q9GZM3 115 aaKnown RBP3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 PLEKHF2Q9H8W4 249 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 PXMP4Q9Y6I8 212 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 SCN1AP35498 2009 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 LRRC37A2A6NM11 1700 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 SHROOM3Q8TF72 1996 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 DSPPQ9NZW4 1301 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 CACNA1BQ00975 2339 aa3.69□□□□□ -1.82
HMGB3P9-201ENST00000441799 ASPMQ8IZT6 3477 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 A0A0G2JK05 382 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 GRIFINA4D1Z8 144 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 PRR32B1ATL7 298 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 K7N7A8 449 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 TRIAP1O43715 76 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 SSSCA1O60232 199 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 PDCD6O75340 191 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 SCRG1O75711 98 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 NDUFB2O95178 105 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 SRP19P09132 144 aaKnown RBP3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 HLA-DOBP13765 273 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 IGLL1P15814 213 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 LIM2P55344 173 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 ELOCQ15369 112 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 SLC25A30Q5SVS4 291 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 RPS27LQ71UM5 84 aaKnown RBP3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 SH2D6Q7Z4S9 175 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 GTSCR1Q86UQ5 136 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 TMEM256Q8N2U0 113 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 MRPL30Q8TCC3 161 aaKnown RBP3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 GEMIN6Q8WXD5 167 aaKnown RBP3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 NABP1Q96AH0 204 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 LINC00479Q96M42 142 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 NMNAT3Q96T66 252 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 EIF5A2Q9GZV4 153 aaKnown RBP3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 MANBALQ9NQG1 85 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 SERP1Q9Y6X1 66 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 TNRC6AQ8NDV7 1962 aaKnown RBP3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 HELZP42694 1942 aaKnown RBP3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 ALPK3Q96L96 1907 aa3.68□□□□□ -1.82
HMGB3P9-201ENST00000441799 VPS13AQ96RL7 3174 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 MCM3APO60318 1980 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 LOC101059948A0A1B0GTJ6 334 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 WI2-2373I1.2A0A1W2PRP0 233 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 MED19A0JLT2 244 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 RBAKDNA6NC62 111 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 A8MWL6 223 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 A8MWV9 139 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 E9PLD3 99 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 C11orf98E9PRG8 122 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 H0YIZ8 118 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 IGHV3-7P01780 117 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 GYPBP06028 91 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 ELK1P19419 428 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 GATA2P23769 480 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 S100A3P33764 101 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 CSRP3P50461 194 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 INSL3P51460 131 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 POU3F1Q03052 451 aaPredicted RBP3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 PAX8Q06710 450 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 ERCC8Q13216 396 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 CST6Q15828 149 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 LGALS9BQ3B8N2 356 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 FAM120AOSQ5T036 256 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 LINC01545Q5VT33 79 aa3.67□□□□□ -1.82
HMGB3P9-201ENST00000441799 C1orf140Q5VVS0 124 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms