RNA–Protein interactions for RNA: ENST00000441024.6

CNOT1-202, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNOT1, Length 4,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-202ENST00000441024 CTAG1AP78358 180 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 SPATA31B1PQ5VZV4 182 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 PIP4P1Q86T03 277 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 Q8NFD4 153 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 FOXC2Q99958 501 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 TRAV9-2A0A087WT02 112 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 A0A0G2JRQ6 117 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 C10orf142B7Z368 130 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 E7EQL1 145 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 HAX1O00165 279 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 TMEM50AO95807 157 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 TEX36Q5VZQ5 186 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 HIST3H2BBQ8N257 126 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 NDUFAF3Q9BU61 184 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 KLK15Q9H2R5 256 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 ZNF581Q9P0T4 197 aa5.22□□□□□ -1.57
CNOT1-202ENST00000441024 ADAMTS20P59510 1910 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 LOC107984156A0A0G2JMH3 177 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 FAM181BA6NEQ2 426 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 IGHV3-11P01762 117 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 PLP1P60201 277 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 ACTL10Q5JWF8 245 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 IGF2-ASQ6U949 168 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 Q6ZRM9 215 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 ARL17AQ8IVW1 177 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 ATOH7Q8N100 152 aa5.21□□□□□ -1.57
CNOT1-202ENST00000441024 SEPSECSQ9HD40 501 aaKnown RBP5.21□□□□□ -1.57
CNOT1-202ENST00000441024 SMAD7O15105 426 aaKnown RBP5.21□□□□□ -1.58
CNOT1-202ENST00000441024 CRXO43186 299 aaPredicted RBP5.21□□□□□ -1.58
CNOT1-202ENST00000441024 TNFSF13O75888 250 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 PDE6HQ13956 83 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 C10orf55Q5SWW7 151 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 Q6ZSR3 168 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 ZNF833PQ6ZTB9 187 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 LINC00477Q96M19 166 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 LINC01587Q99440 93 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 SLC25A2Q9BXI2 301 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 TMEM14BQ9NUH8 114 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 SPEGQ15772 3267 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 MDC1Q14676 2089 aaKnown RBP5.21□□□□□ -1.58
CNOT1-202ENST00000441024 CXCL1P09341 107 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 GATA3P23771 443 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 LY6DQ14210 128 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 RSPO1Q2MKA7 263 aaPredicted RBP5.21□□□□□ -1.58
CNOT1-202ENST00000441024 LDLRAD2Q5SZI1 272 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 ITLN2Q8WWU7 325 aaPredicted RBP5.21□□□□□ -1.58
CNOT1-202ENST00000441024 GFRA4Q9GZZ7 299 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 MS4A6AQ9H2W1 248 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 YAE1D1Q9NRH1 226 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 ALPK2Q86TB3 2170 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 IGLV3-9A0A075B6K5 115 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 TRAV40A0A0B4J280 105 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 IGKV3-20P01619 116 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 MST1LQ2TV78 715 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 C15orf32Q32M92 178 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 ZNF524Q96C55 264 aa5.21□□□□□ -1.58
CNOT1-202ENST00000441024 PRSS2P07478 247 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 COL8A2P25067 703 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 MEIG1Q5JSS6 88 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 TMEM170BQ5T4T1 132 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 UNQ6494/PRO21346Q6UXR6 183 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 NIT1Q86X76 327 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 HIST1H2BLQ99880 126 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 MRPL27Q9P0M9 148 aaKnown RBP5.2□□□□□ -1.58
CNOT1-202ENST00000441024 DKK1O94907 266 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 SRSF6Q13247 344 aaKnown RBP5.2□□□□□ -1.58
CNOT1-202ENST00000441024 PSG3Q16557 428 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 LYPD2Q6UXB3 125 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 FAM19A2Q8N3H0 131 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 DPM2O94777 84 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 CD7P09564 240 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 CD24P25063 80 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 ZNF138P52744 262 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 Q6ZR03 302 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 C8orf31Q8N9H6 132 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 C18orf15Q96N68 181 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 HS3ST6Q96QI5 342 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 SHANK2-AS3Q9BTD1 123 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 SCRT1Q9BWW7 348 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 ZNF492Q9P255 531 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 CYSLTR1Q9Y271 337 aa5.2□□□□□ -1.58
CNOT1-202ENST00000441024 PGPEP1LA6NFU8 196 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 PMS2P5A8MQ11 134 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 YPEL3P61236 119 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-202ENST00000441024 KRTAP27-1Q3LI81 207 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 FAM90A2PQ658T7 463 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 ZNF329Q86UD4 541 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 NDUFA4L2Q9NRX3 87 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 CEP290O15078 2479 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 FRYLO94915 3013 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 FAM231BA6NCW3 169 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 NDUFB8O95169 186 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 GNLYP22749 145 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 UBE2E1P51965 193 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 SUMO2P61956 95 aaKnown RBP5.19□□□□□ -1.58
CNOT1-202ENST00000441024 ZNF562Q6V9R5 426 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 FAM110DQ8TAY7 271 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-202ENST00000441024 SSBP4Q9BWG4 385 aaPredicted RBP5.19□□□□□ -1.58
CNOT1-202ENST00000441024 TRAV8-6A0A0B4J262 113 aa5.19□□□□□ -1.58
CNOT1-202ENST00000441024 PSMB11A5LHX3 300 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 193.9 ms