RNA–Protein interactions for RNA: ENST00000436724.5

PTPRF-207, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 2,168 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-207ENST00000436724 GALR1P47211 349 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 WFDC11Q8NEX6 87 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 ELOVL1Q9BW60 279 aa16.57■□□□□ 0.24
PTPRF-207ENST00000436724 TECRQ9NZ01 308 aaKnown RBP16.57■□□□□ 0.24
PTPRF-207ENST00000436724 J3QLI3 93 aa16.56■□□□□ 0.24
PTPRF-207ENST00000436724 PSG1P11464 419 aa16.56■□□□□ 0.24
PTPRF-207ENST00000436724 ZNF355PQ9NSJ1 428 aa16.56■□□□□ 0.24
PTPRF-207ENST00000436724 LINC00527Q9UJ94 153 aa16.56■□□□□ 0.24
PTPRF-207ENST00000436724 YTHDF2Q9Y5A9 579 aaKnown RBP16.56■□□□□ 0.24
PTPRF-207ENST00000436724 PDZD11Q5EBL8 140 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 PRSS57Q6UWY2 283 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 OR10D4PQ8NGN7 298 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 ANAPC16Q96DE5 110 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 FAM167A-AS1Q96KT0 104 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 PFDN5Q99471 154 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 SLC25A2Q9BXI2 301 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 TLN2Q9Y4G6 2542 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 A6NDX4 124 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 C8orf88P0DMB2 117 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 BPIFB3P59826 476 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 DEFB112Q30KQ8 113 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 C9orf152Q5JTZ5 239 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 LINC00305Q7Z4B0 112 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 OR1L4Q8NGR5 311 aa16.55■□□□□ 0.24
PTPRF-207ENST00000436724 CIARTQ8N365 385 aaPredicted RBP16.54■□□□□ 0.24
PTPRF-207ENST00000436724 OR5B12Q96R08 314 aa16.54■□□□□ 0.24
PTPRF-207ENST00000436724 MRPL32Q9BYC8 188 aaKnown RBP16.54■□□□□ 0.24
PTPRF-207ENST00000436724 F8W735 103 aaPredicted RBP16.54■□□□□ 0.24
PTPRF-207ENST00000436724 PDE6DO43924 150 aa16.54■□□□□ 0.24
PTPRF-207ENST00000436724 CDPF1Q6NVV7 123 aa16.54■□□□□ 0.24
PTPRF-207ENST00000436724 OR5AU1Q8NGC0 362 aa16.54■□□□□ 0.24
PTPRF-207ENST00000436724 FAM110DQ8TAY7 271 aaPredicted RBP16.54■□□□□ 0.24
PTPRF-207ENST00000436724 SNRPCP09234 159 aaKnown RBP16.53■□□□□ 0.24
PTPRF-207ENST00000436724 TAS2R45P59539 299 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 FBXL7Q9UJT9 491 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 HECTD1Q9ULT8 2610 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 NDUFB4O95168 129 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 PYYP10082 97 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 LYZP61626 148 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 PQLC2Q6ZP29 291 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 DERL1Q9BUN8 251 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 THYN1Q9P016 225 aa16.53■□□□□ 0.24
PTPRF-207ENST00000436724 FLNAP21333 2647 aaKnown RBP16.52■□□□□ 0.24
PTPRF-207ENST00000436724 GNG7O60262 68 aa16.52■□□□□ 0.24
PTPRF-207ENST00000436724 RD3LP0DJH9 198 aa16.52■□□□□ 0.24
PTPRF-207ENST00000436724 BLCAPP62952 87 aa16.52■□□□□ 0.24
PTPRF-207ENST00000436724 LINC01551Q86U37 167 aa16.52■□□□□ 0.24
PTPRF-207ENST00000436724 C21orf62Q9NYP8 219 aa16.52■□□□□ 0.24
PTPRF-207ENST00000436724 IGHV4-59P01825 116 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 Q56UQ5 140 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 LEMD1Q68G75 181 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 Q6ZS46 218 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 RNF2Q99496 336 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 FASNP49327 2511 aaKnown RBP16.51■□□□□ 0.23
PTPRF-207ENST00000436724 GGCTO75223 188 aaKnown RBP16.51■□□□□ 0.23
PTPRF-207ENST00000436724 HYPMO75409 117 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 MFAP4P55083 255 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 MS4A10Q96PG2 267 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 AURKAIP1Q9NWT8 199 aaPredicted RBP16.51■□□□□ 0.23
PTPRF-207ENST00000436724 PITPNC1Q9UKF7 332 aa16.51■□□□□ 0.23
PTPRF-207ENST00000436724 A0A1W2PPQ1 181 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 F6UZH7 168 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 TMEM167BQ9NRX6 74 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 OR2T8A6NH00 312 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 PPP5D1E7EU14 171 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 FABP4P15090 132 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 SRP14P37108 136 aaKnown RBP16.5■□□□□ 0.23
PTPRF-207ENST00000436724 UBE2L3P68036 154 aaKnown RBP16.5■□□□□ 0.23
PTPRF-207ENST00000436724 RHOGP84095 191 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 C15orf32Q32M92 178 aa16.5■□□□□ 0.23
PTPRF-207ENST00000436724 SCO2A0A1W2PP80 73 aa16.49■□□□□ 0.23
PTPRF-207ENST00000436724 FSHBP01225 129 aa16.49■□□□□ 0.23
PTPRF-207ENST00000436724 PLP1P60201 277 aa16.49■□□□□ 0.23
PTPRF-207ENST00000436724 TRAV41A0A0B4J266 112 aa16.48■□□□□ 0.23
PTPRF-207ENST00000436724 SMAD7O15105 426 aaKnown RBP16.48■□□□□ 0.23
PTPRF-207ENST00000436724 CYB5R2Q6BCY4 276 aa16.48■□□□□ 0.23
PTPRF-207ENST00000436724 PGPEP1LA6NFU8 196 aa16.48■□□□□ 0.23
PTPRF-207ENST00000436724 NOL4LQ96MY1 436 aaPredicted RBP16.48■□□□□ 0.23
PTPRF-207ENST00000436724 HIST1H2BLQ99880 126 aa16.48■□□□□ 0.23
PTPRF-207ENST00000436724 TXNDC17Q9BRA2 123 aa16.48■□□□□ 0.23
PTPRF-207ENST00000436724 PAXXQ9BUH6 204 aa16.48■□□□□ 0.23
PTPRF-207ENST00000436724 TRBV20OR9-2A0A075B6H5 130 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 TRBV9A0A0B4J1U6 114 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 TYMSP04818 313 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 FAM3BP58499 235 aaPredicted RBP16.47■□□□□ 0.23
PTPRF-207ENST00000436724 HIGD1AQ9Y241 93 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 TOMM40O96008 361 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 IL4P05112 153 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 CD99P14209 185 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 HIST1H1BP16401 226 aaKnown RBP16.47■□□□□ 0.23
PTPRF-207ENST00000436724 C19orf54Q5BKX5 351 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 TMEM183AQ8IXX5 376 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 ZNF491Q8N8L2 437 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 TMEM68Q96MH6 324 aa16.47■□□□□ 0.23
PTPRF-207ENST00000436724 ZNF48Q96MX3 618 aaPredicted RBP16.47■□□□□ 0.23
PTPRF-207ENST00000436724 GGTLC3B5MD39 225 aa16.46■□□□□ 0.23
PTPRF-207ENST00000436724 FXYD5Q96DB9 178 aa16.46■□□□□ 0.23
PTPRF-207ENST00000436724 CHRDL1Q9BU40 450 aa16.46■□□□□ 0.23
PTPRF-207ENST00000436724 AKAP9Q99996 3911 aa16.46■□□□□ 0.23
PTPRF-207ENST00000436724 TRAV30A0A087WSZ9 112 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms