RNA–Protein interactions for RNA: ENST00000433892.6

CD44-209, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,292 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-209ENST00000433892 LYZP61626 148 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 BATFQ16520 125 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 SPATA45Q537H7 98 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 C5orf17Q8NAS9 161 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 LINC01560Q8TB33 94 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 BORCS7Q96B45 105 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 ALKBH7Q9BT30 221 aaPredicted RBP9.4□□□□□ -0.9
CD44-209ENST00000433892 MRPL27Q9P0M9 148 aaKnown RBP9.4□□□□□ -0.9
CD44-209ENST00000433892 PPIAL4CA0A0B4J2A2 164 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 M0QZK8 103 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 TOX4O94842 621 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 TCRAP04437 139 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 PPIAL4GP0DN37 164 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 PLGLAQ15195 96 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 SRSF12Q8WXF0 261 aaKnown RBP9.4□□□□□ -0.9
CD44-209ENST00000433892 RPEQ96AT9 228 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 RPP21Q9H633 154 aaKnown RBP9.4□□□□□ -0.9
CD44-209ENST00000433892 HIGD1AQ9Y241 93 aa9.4□□□□□ -0.9
CD44-209ENST00000433892 TRAV8-1A0A0A6YYK1 113 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 A0A1B0GXF2 115 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 A6NNC1 897 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 HSBP1O75506 76 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 TOMM40O96008 361 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 LTAP01374 205 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 IGLC1P0CG04 106 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 CD24P25063 80 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 CTRLP40313 264 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 CA7P43166 264 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 LCN12Q6JVE5 192 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 ATOH7Q8N100 152 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 GTSF1Q8WW33 167 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 FMC1Q96HJ9 113 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 NBASA2RRP1 2371 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 P01737 135 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 RBP4P02753 201 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 PLP1P60201 277 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 RNASEKQ6P5S7 137 aaKnown RBP9.39□□□□□ -0.91
CD44-209ENST00000433892 ATP5L2Q7Z4Y8 100 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 SMIM12Q96EX1 92 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 PGLYRP4Q96LB8 373 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 PRSS22Q9GZN4 317 aa9.39□□□□□ -0.91
CD44-209ENST00000433892 HRNRQ86YZ3 2850 aaPredicted RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 M0R2Z0 102 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 OR2J3O76001 311 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 RPLP1P05386 114 aaKnown RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 ZNF25P17030 456 aaPredicted RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 KLF5Q13887 457 aaPredicted RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 EXOC3-AS1Q8N2X6 119 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 MUC15Q8N387 334 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 SLC25A39Q9BZJ4 359 aaPredicted RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 PTPRQQ9UMZ3 2332 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 C19orf71A6NCJ1 209 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 A8MWL6 223 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 I3L2K1 104 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 CNIH1O95406 144 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 PRB4P10163 310 aaPredicted RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 GRNP28799 593 aaKnown RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 HBBP68871 147 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 MAJINQ3KP22 176 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 LDLRAD2Q5SZI1 272 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 Q71RC1 249 aaPredicted RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 MRPL52Q86TS9 123 aaKnown RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 IGFBPL1Q8WX77 278 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 DAZAP1Q96EP5 407 aaKnown RBP9.38□□□□□ -0.91
CD44-209ENST00000433892 RASL11BQ9BPW5 248 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 ONECUT1Q9UBC0 465 aa9.38□□□□□ -0.91
CD44-209ENST00000433892 FAM181BA6NEQ2 426 aa9.37□□□□□ -0.91
CD44-209ENST00000433892 FOXA3P55318 350 aaPredicted RBP9.37□□□□□ -0.91
CD44-209ENST00000433892 RBPJQ06330 500 aa9.37□□□□□ -0.91
CD44-209ENST00000433892 MMDQ15546 238 aa9.37□□□□□ -0.91
CD44-209ENST00000433892 ZNF124Q15973 351 aa9.37□□□□□ -0.91
CD44-209ENST00000433892 EBLN2Q6P2I7 272 aa9.37□□□□□ -0.91
CD44-209ENST00000433892 CIARTQ8N365 385 aaPredicted RBP9.37□□□□□ -0.91
CD44-209ENST00000433892 VKORC1Q9BQB6 163 aa9.37□□□□□ -0.91
CD44-209ENST00000433892 FAM90A27PA6NNH2 459 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 M0QZ24 198 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 TIMM23O14925 209 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 LY6HO94772 140 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 IGKV1-17P01599 117 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 GOLT1AQ6ZVE7 132 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 PRNTQ86SH4 94 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 ARHGAP32A7KAX9 2087 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 LY6LH3BQJ8 138 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 SIAH2O43255 324 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 IGLC2P0DOY2 106 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 PAX2Q02962 417 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 FOXC1Q12948 553 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 PMCHL1Q16048 86 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 Q56UQ5 140 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 Q86TA4 180 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 URB1-AS1Q96HZ7 61 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 OTORQ9NRC9 128 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 ZNF492Q9P255 531 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 HILPDAQ9Y5L2 63 aa9.36□□□□□ -0.91
CD44-209ENST00000433892 COL8A1P27658 744 aa9.35□□□□□ -0.91
CD44-209ENST00000433892 ZNF672Q499Z4 452 aaPredicted RBP9.35□□□□□ -0.91
CD44-209ENST00000433892 CT83Q5H943 113 aa9.35□□□□□ -0.91
CD44-209ENST00000433892 C17orf77Q96MU5 243 aa9.35□□□□□ -0.91
CD44-209ENST00000433892 TXN2Q99757 166 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 155.4 ms