RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 DUXBA0A1W2PPF3 345 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 C2orf70A6NJV1 201 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 H3BUT2 72 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 J3QR89 54 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SDCBPO00560 298 aaPredicted RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 CDC42EP2O14613 210 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SOCS1O15524 211 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 XRCC2O43543 280 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 PITX3O75364 302 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF737O75373 536 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 GYPAP02724 150 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 MRPL3P09001 348 aaKnown RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 CRYBB3P26998 211 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 PTGDSP41222 190 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 CA7P43166 264 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 VDAC2P45880 294 aaPredicted RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 UQCRFS1P47985 274 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF121P58317 390 aaPredicted RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 PPP1CBP62140 327 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 PSG4Q00888 419 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 EWSR1Q01844 656 aaKnown RBP eCLIP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SP4Q02446 784 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 CATR1Q13166 79 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 DIAPH2-AS1Q14236 149 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF77Q15935 545 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF726P1Q15940 193 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 POU2AF1Q16633 256 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 LRRC75BQ2VPJ9 315 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ACSF3Q4G176 576 aaPredicted RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM97Q5BJF2 176 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 OR10J3Q5JRS4 329 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 VAX1Q5SQQ9 334 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 Q6AWC8 147 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 EBLN2Q6P2I7 272 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 KCNIP4Q6PIL6 250 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 AGTRAPQ6RW13 159 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SHISA6Q6ZSJ9 500 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 PAQR9Q6ZVX9 377 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 STHQ8IWL8 128 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 PIANPQ8IYJ0 282 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 OSR2Q8N2R0 312 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ZFP62Q8NB50 900 aaPredicted RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 OR10AG1Q8NH19 301 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 OR10G6Q8NH81 332 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 PPTC7Q8NI37 304 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 TSKUQ8WUA8 353 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 EMG1Q92979 244 aaKnown RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 FAM3DQ96BQ1 224 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 TM4SF19Q96DZ7 209 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 NEURL3Q96EH8 262 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ATP5SQ99766 215 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SMIM7Q9BQ49 75 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 C20orf78Q9BR46 151 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 FAM103A1Q9BTL3 118 aaKnown RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 MAP1LC3CQ9BXW4 147 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SAMD10Q9BYL1 202 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 TTTY10Q9BZA0 68 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 TMEM126AQ9H061 195 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 OR2D2Q9H210 308 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SPRR3Q9UBC9 169 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 LSM5Q9Y4Y9 91 aaKnown RBP2.09□□□□□ -2.07
LINC01040-201ENST00000425048 IER3IP1Q9Y5U9 82 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 SPCS1Q9Y6A9 102 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 ATG2BQ96BY7 2078 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 HEATR5BQ9P2D3 2071 aa2.09□□□□□ -2.07
LINC01040-201ENST00000425048 TANC2Q9HCD6 1990 aa2.09□□□□□ -2.08
LINC01040-201ENST00000425048 TRAV36DV7A0A075B6V5 113 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 IGHV1OR15-1A0A075B7D0 117 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 TRGV10A0A0A0MS01 117 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 NSG1A0A0A6YYJ2 146 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 A0A1W2PPV9 198 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 A0A1W2PRD5 423 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 A0A1W2PRF3 423 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 A0A1W2PRM7 423 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 CEBPZOSA8MTT3 80 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 TMEM250H0YL14 139 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 HMGN4O00479 90 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 RER1O15258 196 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 HMGB3O15347 200 aaKnown RBP2.08□□□□□ -2.08
LINC01040-201ENST00000425048 SLC16A7O60669 478 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 FCN3O75636 299 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 ETHE1O95571 254 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 MOSP00540 346 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 CA1P00915 261 aaPredicted RBP2.08□□□□□ -2.08
LINC01040-201ENST00000425048 FGF1P05230 155 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 CA3P07451 260 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 HIST1H1EP10412 219 aaKnown RBP2.08□□□□□ -2.08
LINC01040-201ENST00000425048 FGF6P10767 208 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 AREGP15514 252 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 HIST1H1DP16402 221 aaKnown RBP2.08□□□□□ -2.08
LINC01040-201ENST00000425048 RPL7P18124 248 aaKnown RBP2.08□□□□□ -2.08
LINC01040-201ENST00000425048 CBLN1P23435 193 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 HTR1DP28221 377 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 INSL3P51460 131 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 TAS2R46P59540 309 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 FMODQ06828 376 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 WFDC2Q14508 124 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 PSG5Q15238 335 aa2.08□□□□□ -2.08
LINC01040-201ENST00000425048 ZNF141Q15928 474 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms