RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	ABHD1	Q96SE0	405 aa		5.74	□□□□□ -1.49
NIF3L1-206	ENST00000416651	LINC01587	Q99440	93 aa		5.74	□□□□□ -1.49
NIF3L1-206	ENST00000416651	C9orf16	Q9BUW7	83 aa		5.74	□□□□□ -1.49
NIF3L1-206	ENST00000416651	FXYD6	Q9H0Q3	95 aa		5.74	□□□□□ -1.49
NIF3L1-206	ENST00000416651		A0A0B4J293	547 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	SMIM31	A0A1B0GVY4	71 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	CCDC160	A6NGH7	325 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	UCP1	P25874	307 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	RFX2	P48378	723 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	HOXA1	P49639	335 aa	Predicted RBP	5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	CNN1	P51911	297 aa	Known RBP	5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	SPHAR	Q15513	63 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	PHLDA2	Q53GA4	152 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	EBLN2	Q6P2I7	272 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	WFDC10B	Q8IUB3	73 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	ARRDC1	Q8N5I2	433 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	COQ8A	Q8NI60	647 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	TMEM170A	Q8WVE7	144 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	MRGPRF	Q96AM1	343 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	PPP1R14B	Q96C90	147 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	CENPO	Q9BU64	300 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	FKBP11	Q9NYL4	201 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	MSRB1	Q9NZV6	116 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	DOK5	Q9P104	306 aa		5.73	□□□□□ -1.49
NIF3L1-206	ENST00000416651	FAT4	Q6V0I7	4981 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	METTL21EP	A6NDL7	271 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	PFDN1	O60925	122 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	INS	P01308	110 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	IGKV1-5	P01602	117 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	HSMCR30	P0CW71	290 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	PSG1	P11464	419 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	OR10J1	P30954	320 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	SNCA	P37840	140 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	HSPA13	P48723	471 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	PSMB3	P49720	205 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	HOGA1	Q86XE5	327 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	RNF182	Q8N6D2	247 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651		Q8N814	137 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	RNASE8	Q8TDE3	154 aa	Known RBP	5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651		Q8WTZ3	238 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	PARD6G	Q9BYG4	376 aa	Predicted RBP	5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	FAM212B	Q9NTI7	297 aa	Predicted RBP	5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	LPA	P08519	4548 aa		5.72	□□□□□ -1.49
NIF3L1-206	ENST00000416651	TRAV8-2	A0A0B4J237	113 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651		A0A0G2JRQ6	117 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	PTGES3L	E9PB15	166 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	CCNK	O75909	580 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	IGLV2-8	P01709	118 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	YPEL3	P61236	119 aa	Predicted RBP	5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	LELP1	Q5T871	98 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	LYPD5	Q6UWN5	251 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	IZUMO2	Q6UXV1	221 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651		Q6ZTI0	123 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	H2BFWT	Q7Z2G1	175 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	NFE4	Q86UQ8	179 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TSPAN14	Q8NG11	270 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	NPIPB3	Q92617	1050 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	UFD1	Q92890	307 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	ZNF2	Q9BSG1	426 aa	Predicted RBP	5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	PBDC1	Q9BVG4	233 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	MND1	Q9BWT6	205 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	PLCXD1	Q9NUJ7	323 aa		5.71	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TRAV18	A0A075B6X5	111 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651	ARL6IP5	O75915	188 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651	ID1	P41134	155 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651	BSX	Q3C1V8	233 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651	OR1S2	Q8NGQ3	325 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651	OR5H6	Q8NGV6	325 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651	CIRBP-AS1	Q8TBR5	109 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651	C16orf92	Q96LL3	132 aa		5.7	□□□□□ -1.5
NIF3L1-206	ENST00000416651		H3BNG1	76 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	LECT2	O14960	151 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	NOL3	O60936	208 aa	Known RBP	5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TOMM40	O96008	361 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	PMP2	P02689	132 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	RD3L	P0DJH9	198 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	RPL5	P46777	297 aa	Known RBP	5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	HERV-K104	P61576	105 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	ZNF90	Q03938	601 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	CNPY1	Q3B7I2	92 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TMEM144	Q7Z5S9	345 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TBC1D26	Q86UD7	250 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	CROCCP3	Q8IVE0	287 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	SLC35G3	Q8N808	338 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	NTN5	Q8WTR8	489 aa	Predicted RBP	5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	C16orf74	Q96GX8	76 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	ACY3	Q96HD9	319 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	MRPS26	Q9BYN8	205 aa	Known RBP	5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	RPRM	Q9NS64	109 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	EHF	Q9NZC4	300 aa		5.69	□□□□□ -1.5
NIF3L1-206	ENST00000416651	IGKV1D-37	A0A075B6S9	117 aa		5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TRAV30	A0A087WSZ9	112 aa		5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	INS-IGF2	F8WCM5	200 aa		5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	ISLR	O14498	428 aa		5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	CASQ2	O14958	399 aa	Predicted RBP	5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TNFAIP8	O95379	198 aa		5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	C1QB	P02746	253 aa		5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	RAB3B	P20337	219 aa		5.68	□□□□□ -1.5
NIF3L1-206	ENST00000416651	TAS2R60	P59551	318 aa		5.68	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 119.4 ms