RNA–Protein interactions for RNA: ENST00000414479.1

SMC4P1-201, Transcript of structural maintenance of chromosomes 4 pseudogene 1, humanhuman

BASIC

Gene SMC4P1, Length 527 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4P1-201ENST00000414479 KTN1-AS1Q86SY8 53 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 C2orf50Q96LR7 162 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 SCGB3A1Q96QR1 104 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 C8orf4Q9NR00 106 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 OPTCQ9UBM4 332 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 COL5A1P20908 1838 aaPredicted RBP3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 RTL9Q8NET4 1388 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 DNAH12Q6ZR08 3092 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 LAMB1P07942 1786 aa3.23□□□□□ -1.89
SMC4P1-201ENST00000414479 HMSDA8MTL9 139 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 J3QRK9 145 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 PPBPP02775 128 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 RPS4Y1P22090 263 aaKnown RBP3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 EVX1P49640 407 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 DEFA1P59665 94 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 TAF1AQ15573 450 aaPredicted RBP3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 C12orf74Q32Q52 190 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 ZNF791Q3KP31 576 aaPredicted RBP3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 C11orf40Q8WZ69 217 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 H1FXQ92522 213 aaKnown RBP3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 KRTAP4-4Q9BYR3 166 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 RNASE7Q9H1E1 156 aaKnown RBP3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 SLC39A9Q9NUM3 307 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 CHD6Q8TD26 2715 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 MALRD1Q5VYJ5 2156 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 FAM208BQ5VWN6 2430 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 NCOR2Q9Y618 2525 aa3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 FLNBO75369 2602 aaKnown RBP3.22□□□□□ -1.89
SMC4P1-201ENST00000414479 GVINP1Q7Z2Y8 2422 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 ICE1Q9Y2F5 2266 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 REV3LO60673 3130 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 MAST2Q6P0Q8 1798 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 TRBV10-2A0A0K0K1G8 114 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 METTL15P1P0C7V9 234 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 S100A4P26447 101 aaKnown RBP3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 EIF2B2P49770 351 aaKnown RBP3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 MOGQ16653 247 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 TMED4Q7Z7H5 227 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 TMEM106AQ96A25 262 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 TMEM106BQ9NUM4 274 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 TVP23BQ9NYZ1 205 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 PTPRBP23467 1997 aa3.21□□□□□ -1.9
SMC4P1-201ENST00000414479 HEATR5AQ86XA9 2040 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 UBR2Q8IWV8 1755 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 ZFHX2Q9C0A1 2572 aaPredicted RBP3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 CHD7Q9P2D1 2997 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 A0A0G2JQZ4 141 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 ZNF682O95780 498 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 IGKV1-5P01602 117 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 ERP29P30040 261 aaKnown RBP3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 LRRC28Q86X40 367 aaPredicted RBP3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 OR11H6Q8NGC7 330 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 DCANP1Q8TF63 244 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 ZCCHC13Q8WW36 166 aaKnown RBP3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 AP3S1Q92572 193 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 ARMC1Q9NVT9 282 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 PCNX2A6NKB5 2137 aa3.2□□□□□ -1.9
SMC4P1-201ENST00000414479 KMT2BQ9UMN6 2715 aaPredicted RBP3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 FAM159BA6NKW6 160 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 S1PR2O95136 353 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 CASP1P29466 404 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 TRAPPC6BQ86SZ2 158 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 GINS4Q9BRT9 223 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 PARVBQ9HBI1 364 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 DUOX1Q9NRD9 1551 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 ZFHX4Q86UP3 3567 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 MAST4O15021 2626 aa3.19□□□□□ -1.9
SMC4P1-201ENST00000414479 MYH11P35749 1972 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 ZNF860A6NHJ4 632 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 E5RI56 91 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 ZNF80P51504 273 aaPredicted RBP3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 DHRS4L2Q6PKH6 230 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 MIR17HGQ75NE6 70 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 SLC36A1Q7Z2H8 476 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 S100A7AQ86SG5 101 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 DNAJC9Q8WXX5 260 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 TIMM21Q9BVV7 248 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 NCKAP5O14513 1909 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 CHD9Q3L8U1 2897 aa3.18□□□□□ -1.9
SMC4P1-201ENST00000414479 DOCK3Q8IZD9 2030 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 ROBO3Q96MS0 1386 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 DDX60Q8IY21 1712 aaKnown RBP3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 MEIKINA0A087WXM9 373 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 A0A0D9SEW6 157 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 MEIS3P1A6NDR6 274 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 OR51F1A6NGY5 319 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 TRGC1P0CF51 173 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 RPL19P84098 196 aaKnown RBP3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 SLC38A11Q08AI6 406 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 LYRM7Q5U5X0 104 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 Q6Q795 121 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 DPPA3Q6W0C5 159 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 BPIFA4PQ86YQ2 179 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 CYSLTR1Q9Y271 337 aa3.17□□□□□ -1.9
SMC4P1-201ENST00000414479 VPS13AQ96RL7 3174 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 LRRC37AA6NMS7 1700 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 IGKV1D-43A0A0B4J1Z2 117 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 A0A0D9SG52 128 aa3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 YPEL3P61236 119 aaPredicted RBP3.16□□□□□ -1.9
SMC4P1-201ENST00000414479 HSPE1P61604 102 aaKnown RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms