RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 FAM87AP0C7U9 286 aa14.08□□□□□ -0.15
SDCBP-202ENST00000413219 CCL8P80075 99 aa14.08□□□□□ -0.15
SDCBP-202ENST00000413219 HIST1H1AQ02539 215 aaPredicted RBP14.08□□□□□ -0.15
SDCBP-202ENST00000413219 RUSC1-AS1Q66K80 236 aa14.08□□□□□ -0.15
SDCBP-202ENST00000413219 PMCHL2Q9BQD1 86 aa14.08□□□□□ -0.15
SDCBP-202ENST00000413219 HIGD1AQ9Y241 93 aa14.08□□□□□ -0.15
SDCBP-202ENST00000413219 M0R296 226 aa14.08□□□□□ -0.16
SDCBP-202ENST00000413219 RPL27AP46776 148 aaKnown RBP14.08□□□□□ -0.16
SDCBP-202ENST00000413219 HCP5Q6MZN7 132 aa14.08□□□□□ -0.16
SDCBP-202ENST00000413219 ARL6IP6Q8N6S5 226 aa14.08□□□□□ -0.16
SDCBP-202ENST00000413219 A0A1B0GW15 77 aa14.07□□□□□ -0.16
SDCBP-202ENST00000413219 C17orf100A8MU93 164 aa14.07□□□□□ -0.16
SDCBP-202ENST00000413219 CD5LO43866 347 aa14.07□□□□□ -0.16
SDCBP-202ENST00000413219 TOX4O94842 621 aa14.07□□□□□ -0.16
SDCBP-202ENST00000413219 CEACAM8P31997 349 aaPredicted RBP14.07□□□□□ -0.16
SDCBP-202ENST00000413219 PRR31Q5SQ13 230 aa14.07□□□□□ -0.16
SDCBP-202ENST00000413219 CADP27708 2225 aa14.07□□□□□ -0.16
SDCBP-202ENST00000413219 PPIAL4EA0A075B759 164 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 PPIAL4DF5H284 164 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 OVOL3O00110 214 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 CEACAM4O75871 244 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 PPBPP02775 128 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 PPIAL4FP0DN26 164 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 TP73-AS1Q9UF72 201 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 MUC21A0A0G2JKD1 596 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 MUC21A0A140T8X8 626 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 A0A1B0GUT8 65 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 NDUFB3O43676 98 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 IGLV2-11P01706 119 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 HTR1DP28221 377 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 DLX6P56179 175 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 RIGQ13278 110 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 MUC21Q5SSG8 566 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 ZADH2Q8N4Q0 377 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 NEU4Q8WWR8 484 aaPredicted RBP14.06□□□□□ -0.16
SDCBP-202ENST00000413219 TMUB1Q9BVT8 246 aa14.06□□□□□ -0.16
SDCBP-202ENST00000413219 TMEM178BH3BS89 294 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 TNFRSF13BO14836 293 aaPredicted RBP14.05□□□□□ -0.16
SDCBP-202ENST00000413219 ASCL5Q7RTU5 278 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 LHFPL4Q7Z7J7 247 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 RPRMLQ8N4K4 120 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 RITA1Q96K30 269 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 GPR179Q6PRD1 2367 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 CRYGBP07316 175 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 COTL1Q14019 142 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 CIARTQ8N365 385 aaPredicted RBP14.05□□□□□ -0.16
SDCBP-202ENST00000413219 NBEAQ8NFP9 2946 aa14.05□□□□□ -0.16
SDCBP-202ENST00000413219 H3BTX0 84 aa14.04□□□□□ -0.16
SDCBP-202ENST00000413219 COX8AP10176 69 aa14.04□□□□□ -0.16
SDCBP-202ENST00000413219 FAM27E3Q08E93 113 aa14.04□□□□□ -0.16
SDCBP-202ENST00000413219 TMEM108Q6UXF1 575 aa14.04□□□□□ -0.16
SDCBP-202ENST00000413219 C22orf34Q6ZV56 151 aa14.04□□□□□ -0.16
SDCBP-202ENST00000413219 AP5S1Q9NUS5 200 aa14.04□□□□□ -0.16
SDCBP-202ENST00000413219 RNF24Q9Y225 148 aa14.04□□□□□ -0.16
SDCBP-202ENST00000413219 F11RQ9Y624 299 aaKnown RBP14.04□□□□□ -0.16
SDCBP-202ENST00000413219 DEFB109BQ30KR1 87 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 TMEM155Q4W5P6 130 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 GOLT1AQ6ZVE7 132 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 PRNTQ86SH4 94 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 DPF1Q92782 380 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 TRAV8-1A0A0A6YYK1 113 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 OR2T8A6NH00 312 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 ENSAO43768 121 aaKnown RBP14.03□□□□□ -0.16
SDCBP-202ENST00000413219 GPR183P32249 361 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 ZNF138P52744 262 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 ADIPOQQ15848 244 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 Q6AWC8 147 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 TMEM75Q8N9X5 138 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 ZNF747Q9BV97 191 aa14.03□□□□□ -0.16
SDCBP-202ENST00000413219 SLC25A39Q9BZJ4 359 aaPredicted RBP14.03□□□□□ -0.16
SDCBP-202ENST00000413219 NAV3Q8IVL0 2385 aa14.02□□□□□ -0.16
SDCBP-202ENST00000413219 IGLC1P0CG04 106 aa14.02□□□□□ -0.16
SDCBP-202ENST00000413219 PSG1P11464 419 aa14.02□□□□□ -0.16
SDCBP-202ENST00000413219 LOXP28300 417 aaPredicted RBP14.02□□□□□ -0.16
SDCBP-202ENST00000413219 CSN1S1P47710 185 aa14.02□□□□□ -0.16
SDCBP-202ENST00000413219 LYZP61626 148 aa14.02□□□□□ -0.16
SDCBP-202ENST00000413219 TNFRSF14Q92956 283 aa14.02□□□□□ -0.16
SDCBP-202ENST00000413219 CST9LQ9H4G1 147 aa14.02□□□□□ -0.16
SDCBP-202ENST00000413219 IGHV1-8P0DP01 117 aa14.02□□□□□ -0.17
SDCBP-202ENST00000413219 ARF6P62330 175 aa14.02□□□□□ -0.17
SDCBP-202ENST00000413219 RBPJQ06330 500 aa14.02□□□□□ -0.17
SDCBP-202ENST00000413219 OR10AG1Q8NH19 301 aa14.02□□□□□ -0.17
SDCBP-202ENST00000413219 SIGLEC9Q9Y336 463 aa14.02□□□□□ -0.17
SDCBP-202ENST00000413219 ZNF785A8K8V0 405 aa14.01□□□□□ -0.17
SDCBP-202ENST00000413219 ARMS2P0C7Q2 107 aa14.01□□□□□ -0.17
SDCBP-202ENST00000413219 AMMECR1LQ6DCA0 310 aa14.01□□□□□ -0.17
SDCBP-202ENST00000413219 IGFL3Q6UXB1 125 aa14.01□□□□□ -0.17
SDCBP-202ENST00000413219 LYPD2Q6UXB3 125 aa14.01□□□□□ -0.17
SDCBP-202ENST00000413219 FA2HQ7L5A8 372 aa14.01□□□□□ -0.17
SDCBP-202ENST00000413219 SRSF12Q8WXF0 261 aaKnown RBP14.01□□□□□ -0.17
SDCBP-202ENST00000413219 KAAG1Q9UBP8 84 aa14.01□□□□□ -0.17
SDCBP-202ENST00000413219 PEF1Q9UBV8 284 aaKnown RBP14.01□□□□□ -0.17
SDCBP-202ENST00000413219 CBY3A6NI87 242 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 CSN3P07498 182 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 SEC11AP67812 179 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 OCIAD2Q56VL3 154 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 BPIFA4PQ86YQ2 179 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 LYPD1Q8N2G4 141 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 EXOC3-AS1Q8N2X6 119 aa14□□□□□ -0.17
SDCBP-202ENST00000413219 ZC2HC1AQ96GY0 325 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms