RNA–Protein interactions for RNA: ENST00000409915.8

SF3B1-202, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2 BASIC

Gene SF3B1, Length 600 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-202ENST00000409915 TNFAIP6P98066 277 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-202ENST00000409915 PSG9Q00887 426 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 HIST1H1AQ02539 215 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-202ENST00000409915 KRTAP1-1Q07627 177 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 ARL16Q0P5N6 197 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 Q0VG73 95 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 TMEM187Q14656 261 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 SRSF7Q16629 238 aaKnown RBP eCLIP3.63□□□□□ -1.83
SF3B1-202ENST00000409915 LTC4SQ16873 150 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 IAH1Q2TAA2 248 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF260Q3ZCT1 412 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 SPATA45Q537H7 98 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 FAM27D1Q5T7N8 215 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 DUX4L9Q6RFH8 374 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-202ENST00000409915 Q6ZN92 141 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 C9orf139Q6ZV77 190 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 GTF2H5Q6ZYL4 71 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 SAXO1Q8IYX7 474 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 OR5A1Q8NGJ0 315 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 ITLN1Q8WWA0 313 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 PTH2Q96A98 100 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 FGGYQ96C11 551 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 SMIM19Q96E16 107 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 SEC22AQ96IW7 307 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 C18orf12Q96KH6 178 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 LYZL4Q96KX0 146 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 C2orf50Q96LR7 162 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 RTBDNQ9BSG5 229 aaPredicted RBP3.63□□□□□ -1.83
SF3B1-202ENST00000409915 TMEM133Q9H2Q1 129 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 PARLQ9H300 379 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 ISG20L2Q9H9L3 353 aaKnown RBP3.63□□□□□ -1.83
SF3B1-202ENST00000409915 FAM206AQ9NX38 181 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 TRAPPC2LQ9UL33 140 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 HHLA2Q9UM44 414 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 VSIG4Q9Y279 399 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 V9GY05 133 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 MED13LQ71F56 2210 aa3.63□□□□□ -1.83
SF3B1-202ENST00000409915 NF1P21359 2839 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 CR1P17927 2039 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 TRAV9-1A0A075B6T8 112 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 BORCS7-ASMTA0A0B4J1R7 106 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 CD300LBA8K4G0 201 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 IQCF6A8MYZ5 107 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 C15orf65H3BRN8 121 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 MGST3O14880 152 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 PIN1P1O15428 100 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 SRSF10O75494 262 aaKnown RBP3.62□□□□□ -1.83
SF3B1-202ENST00000409915 S1PR2O95136 353 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 LY6G6DO95868 133 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 HAND1O96004 215 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 NRASP01111 189 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 HRASP01112 189 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 HLA-AP01891 365 aaKnown RBP3.62□□□□□ -1.83
SF3B1-202ENST00000409915 ORM1P02763 201 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 CD3DP04234 171 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 SLC25A16P16260 332 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 PRSS3P35030 304 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 AMTP48728 403 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 GPM6AP51674 278 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 DSCR9P59020 149 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF85Q03923 595 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 TMEM267Q0VDI3 215 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-202ENST00000409915 PPP1R1AQ13522 171 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 PMCHL1Q16048 86 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 GCSAMLQ5JQS6 135 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 FAM201AQ5SY85 155 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 AMMECR1LQ6DCA0 310 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 C12orf54Q6X4T0 127 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 C16orf82Q7Z2V1 217 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 CLDND2Q8NHS1 167 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF502Q8TBZ5 544 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 OR51E1Q8TCB6 317 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 CCL17Q92583 94 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 RDH5Q92781 318 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 FLYWCH2Q96CP2 140 aaKnown RBP3.62□□□□□ -1.83
SF3B1-202ENST00000409915 MLST8Q9BVC4 326 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 QTRT1Q9BXR0 403 aaKnown RBP3.62□□□□□ -1.83
SF3B1-202ENST00000409915 KRTAP4-5Q9BYR2 181 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 FGF23Q9GZV9 251 aaPredicted RBP3.62□□□□□ -1.83
SF3B1-202ENST00000409915 PBOV1Q9GZY1 135 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 CST11Q9H112 138 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 PLEKHA3Q9HB20 300 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 ESM1Q9NQ30 184 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 GPR84Q9NQS5 396 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 ANAPC10Q9UM13 185 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 TMEM14AQ9Y6G1 99 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 WSB1Q9Y6I7 421 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 PXMP4Q9Y6I8 212 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 SVEP1Q4LDE5 3571 aa3.62□□□□□ -1.83
SF3B1-202ENST00000409915 SONP18583 2426 aaKnown RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 ABCA2Q9BZC7 2435 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP3.61□□□□□ -1.83
SF3B1-202ENST00000409915 LOC107986453A0A1B0GWG9 222 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 A0A1W2PPI3 338 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 DAPL1A0PJW8 107 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 ZNF850A8MQ14 1090 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 C17orf112F2Z3M2 114 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 J3QLW9 94 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 J3QR89 54 aa3.61□□□□□ -1.83
SF3B1-202ENST00000409915 K7EP34 96 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms