RNA–Protein interactions for RNA: ENST00000409588.1

NIF3L1-205, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,269 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-205ENST00000409588 ZNF705EA8MWA4 302 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 C11orf94C9JXX5 98 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 GIG44P09565 113 aaPredicted RBP10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 PSMB3P49720 205 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 SPANXN5Q5MJ07 72 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 OR8I2Q8N0Y5 310 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 BPIFCQ8NFQ6 507 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 LINC00476Q8WZB0 136 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 SMIM8Q96KF7 97 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 GPR82Q96P67 336 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 MAGT1Q9H0U3 335 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 RNF24Q9Y225 148 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 DNAH1Q9P2D7 4330 aa10.59□□□□□ -0.71
NIF3L1-205ENST00000409588 KNCNA6PVL3 124 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 PRSS46E5RG02 174 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 H3BMM0 161 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 ISLRO14498 428 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 TAS2R30P59541 319 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 LYZP61626 148 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 C4orf46Q504U0 113 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 TMEM144Q7Z5S9 345 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 CSNK1G2-AS1Q8NCQ2 148 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 PPP1R14BQ96C90 147 aa10.58□□□□□ -0.72
NIF3L1-205ENST00000409588 IGKV1OR2-108A0A075B7D4 117 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 FNDC10F2Z333 226 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 IL7P13232 177 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 HLA-DRB4P13762 266 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 GALR1P47211 349 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 SELENOTP62341 195 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 Q8NAQ8 132 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 MITD1Q8WV92 249 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 SDHCQ99643 169 aaPredicted RBP10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 PSENENQ9NZ42 101 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 TBC1D24Q9ULP9 559 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 HLA-DRB4X5D2U9 266 aa10.57□□□□□ -0.72
NIF3L1-205ENST00000409588 SMIM9A6NGZ8 99 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 ADAP1O75689 374 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 LY6G6CO95867 125 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 LGALS9CQ6DKI2 356 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 FOXI2Q6ZQN5 318 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 OR1B1Q8NGR6 318 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 C2CD4CQ8TF44 421 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 NPVFQ9HCQ7 196 aa10.56□□□□□ -0.72
NIF3L1-205ENST00000409588 ZNF98A6NK75 572 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 TSC22D2O75157 780 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 POLR2GP62487 172 aaKnown RBP eCLIP10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 AKR1C1Q04828 323 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 TNP2Q05952 138 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 OR2F1Q13607 317 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 OR10P1Q8NGE3 313 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 NEU1Q99519 415 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 TMEM147Q9BVK8 224 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 GGACTQ9BVM4 153 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 SAV1Q9H4B6 383 aaPredicted RBP10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 RPRMQ9NS64 109 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 FLVCR2Q9UPI3 526 aa10.55□□□□□ -0.72
NIF3L1-205ENST00000409588 LINC00854A0A1B0GVQ3 168 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 IL5P05113 134 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 ANXA7P20073 488 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 C4BPBP20851 252 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 BTCP35070 178 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 PAX9P55771 341 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 PLP1P60201 277 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 NANOS2P60321 138 aaKnown RBP10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 DLK1P80370 383 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 IAH1Q2TAA2 248 aaPredicted RBP10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 PXDC1Q5TGL8 231 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 EBLN2Q6P2I7 272 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 LINC00052Q96N35 136 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 CCDC32Q9BV29 185 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 X6R8D5 127 aa10.54□□□□□ -0.72
NIF3L1-205ENST00000409588 IGHV4-28A0A0C4DH34 117 aa10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 TMEM189A5PLL7 270 aa10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 SOCS3O14543 225 aa10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 LYRM1O43325 122 aa10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 ORM2P19652 201 aa10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 TMEM14EPQ6UXP3 125 aa10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 ACOT7LQ6ZUV0 252 aa10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 WDR12Q9GZL7 423 aaKnown RBP10.53□□□□□ -0.72
NIF3L1-205ENST00000409588 PMS2P5A8MQ11 134 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 H3BP45 60 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 K7EPK0 472 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 PLA2G10O15496 165 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 SSSCA1O60232 199 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 HYPMO75409 117 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 TCRBP04435 133 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 RBMY1A1P0DJD3 496 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 RBMY1CP0DJD4 496 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 RPL7P18124 248 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 RAP2BP61225 183 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 ZNF846Q147U1 533 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 RBMY1FQ15415 496 aaKnown RBP10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 TEPPQ6URK8 271 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 CYP2G1PQ6ZSU1 146 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 ZBTB8BQ8NAP8 495 aaPredicted RBP10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 C16orf92Q96LL3 132 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 RSG1Q9BU20 258 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 C20orf85Q9H1P6 137 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 GSKIPQ9P0R6 139 aa10.52□□□□□ -0.73
NIF3L1-205ENST00000409588 XCL2Q9UBD3 114 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms