RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 GTF2H5Q6ZYL4 71 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 C11orf68Q9H3H3 251 aaKnown RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 MRPL27Q9P0M9 148 aaKnown RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 STAG3L2P0CL84 134 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 FAM90A2PQ658T7 463 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 CLPSL1A2RUU4 121 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 SLC25A20O43772 301 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 SRSF1Q07955 248 aaKnown RBP eCLIP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 ORMDL3Q8N138 153 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 OR5A1Q8NGJ0 315 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 NUDT11Q96G61 164 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 IL36BQ9NZH7 164 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 A0A1W2PRE2 83 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 IZUMO1RA6ND01 250 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 CD5LO43866 347 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 APOHP02749 345 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 LGALS1P09382 135 aaKnown RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 PRB4P10163 310 aaPredicted RBP4.04□□□□□ -1.76
SCN3A-203ENST00000409101 TREML4Q6UXN2 200 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 ARL6IP6Q8N6S5 226 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 SMIM12Q96EX1 92 aa4.04□□□□□ -1.76
SCN3A-203ENST00000409101 APOMO95445 188 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 GP9P14770 177 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 MDKP21741 143 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-203ENST00000409101 ARTNQ5T4W7 220 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 TCF23Q7RTU1 214 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 Q8NA96 180 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 IL17DQ8TAD2 202 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 KLK5Q9Y337 293 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-203ENST00000409101 TEX48A0A1B0GUV7 120 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-203ENST00000409101 IGKV1-16P04430 117 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 PAX9P55771 341 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 SS18Q15532 418 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 RNF151Q2KHN1 245 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 SPATA31B1PQ5VZV4 182 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 IGFL4Q6B9Z1 124 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 C8orf86Q6ZUL3 223 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 ERASQ7Z444 233 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 GFI1Q99684 422 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 SPRY4Q9C004 299 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 KNCNA6PVL3 124 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 C22orf46C9J442 243 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 RPLP1P05386 114 aaKnown RBP4.03□□□□□ -1.76
SCN3A-203ENST00000409101 WDR86Q86TI4 376 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 EXOC3-AS1Q8N2X6 119 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 C18orf15Q96N68 181 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 FOXC2Q99958 501 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 PCM1Q15154 2024 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 DNAL4O96015 105 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 GHRHP01286 108 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 AZU1P20160 251 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 ERCC8Q13216 396 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 NMSQ5H8A3 153 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 PET117Q6UWS5 81 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 CENPVL3A0A0U1RRI6 287 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF815PA8K554 130 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 FOLR2P14207 255 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 LOXL1Q08397 574 aaPredicted RBP4.03□□□□□ -1.76
SCN3A-203ENST00000409101 Q6ZS49 121 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 CBLN2Q8IUK8 224 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 ZNF414Q96IQ9 312 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 CYSLTR1Q9Y271 337 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 RFNGQ9Y644 331 aa4.03□□□□□ -1.76
SCN3A-203ENST00000409101 TRBV7-9A0A0J9YWB2 115 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 A0A1W2PPI3 338 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 SLC17A3O00476 420 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 CGB7P0DN87 165 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 RNASE2P10153 161 aaKnown RBP4.02□□□□□ -1.77
SCN3A-203ENST00000409101 KIAA1644Q3SXP7 199 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 SHANK2-AS3Q9BTD1 123 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 WDR83OSQ9Y284 106 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 TMEM86BQ8N661 226 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 IGHV7-4-1A0A0J9YVY3 117 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE12BA1L429 117 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 INAFM1C9JVW0 142 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-203ENST00000409101 C19orf84I3L1E1 186 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE7O76087 117 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE12FP0CL80 117 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE12GP0CL81 117 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 GAGE12IP0CL82 117 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 MYCNOSP40205 109 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 YPEL3P61236 119 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-203ENST00000409101 ID3Q02535 119 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 ORMDL2Q53FV1 153 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 LURAP1LQ8IV03 231 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 LYPD1Q8N2G4 141 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 MGST2Q99735 147 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 HSPB9Q9BQS6 159 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 LOC102724200A0A096LPH7 203 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-203ENST00000409101 HIGD1CA8MV81 97 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 NDUFA3O95167 84 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 HOXD3P31249 432 aaPredicted RBP4.02□□□□□ -1.77
SCN3A-203ENST00000409101 CCL20P78556 96 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 FBXL19-AS1Q494R0 122 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 ZNF876PQ49A33 203 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 TTC9CQ8N5M4 171 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 OR11H2Q8NH07 326 aa4.02□□□□□ -1.77
SCN3A-203ENST00000409101 CKAP5Q14008 2032 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms