RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CHD2O14647 1828 aaKnown RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 A0A087WXM4 84 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 A0A087X0T9 212 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 BBIP1A8MTZ0 92 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 J3QR89 54 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 GSTZ1O43708 216 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KLF7O75840 302 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FSTL3O95633 263 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 HRASP01112 189 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KRASP01116 189 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 INAFM2P0DMQ5 153 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 P0DMU3 169 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FAM231AP0DMU4 169 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FAM231CP0DMU5 169 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 BCL2P10415 239 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 PTHLHP12272 177 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 NFYBP25208 207 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 AKR1C1Q04828 323 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KLRD1Q13241 179 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 VMA21Q3ZAQ7 101 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 CENPWQ5EE01 88 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KPRPQ5T749 579 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 Q6AWC8 147 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 SBSNQ6UWP8 590 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 Q6ZUT4 128 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 TRAPPC6BQ86SZ2 158 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 AMN1Q8IY45 258 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C3orf56Q8N813 242 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 PPTC7Q8NI37 304 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 DCANP1Q8TF63 244 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C2orf15Q8WU43 125 aaKnown RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 RAB2BQ8WUD1 216 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C10orf82Q8WW14 230 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 GPX7Q96SL4 187 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 SLC25A21Q9BQT8 299 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 MED28Q9H204 178 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 TCEAL2Q9H3H9 227 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C16orf95Q9H693 158 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 TUBA4BQ9H853 241 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 RPRMQ9NS64 109 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FKBP11Q9NYL4 201 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 BET1LQ9NYM9 111 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 DIP2BQ9P265 1576 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 ITGB4P16144 1822 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 PLEKHH2Q8IVE3 1493 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGHV3-21A0A0B4J1V1 117 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 MUC21A0A0G2JKD1 596 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 C4orf51C9J302 202 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 SIX6O95475 246 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 CGB3P0DN86 165 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 CGB7P0DN87 165 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF32P17041 273 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR10J1P30954 320 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 GNG11P61952 73 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 RPS11P62280 158 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 SPANXN3Q5MJ09 141 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 HES3Q5TGS1 186 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 KCNRGQ8N5I3 272 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TEX29Q8N6K0 151 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TMEM75Q8N9X5 138 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 WFDC11Q8NEX6 87 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 NUP35Q8NFH5 326 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 DPH3Q96FX2 82 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TM2D3Q9BRN9 247 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 SHANK2-AS3Q9BTD1 123 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 MRPL32Q9BYC8 188 aaKnown RBP2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 PLA2G12AQ9BZM1 189 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 MARCOQ9UEW3 520 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TP73-AS1Q9UF72 201 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF835Q9Y2P0 537 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 RNF11Q9Y3C5 154 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 PTPRFP10586 1907 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 ARAP2Q8WZ64 1704 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 ABCA9Q8IUA7 1624 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 MROH1Q8NDA8 1641 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 ATP10BO94823 1461 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 CASKIN1Q8WXD9 1431 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGLC7A0M8Q6 106 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 C5orf49A4QMS7 147 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 K7EM74 188 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 K7EP34 96 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 M0R233 179 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BKO60814 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 UBL3O95164 117 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BJP06899 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF286BP0CG31 522 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 IFITM1P13164 125 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H1DP16402 221 aaKnown RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BOP23527 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BBP33778 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 GUCA1AP43080 201 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BDP58876 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BCP62807 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 EIF5AP63241 154 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms