RNA–Protein interactions for RNA: ENST00000406019.1

HMGB1P13-201, Transcript of high mobility group box 1 pseudogene 13, humanhuman

BASIC

Gene HMGB1P13, Length 642 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P13-201ENST00000406019 CHD2O14647 1828 aaKnown RBP2.82□□□□□ -1.96
HMGB1P13-201ENST00000406019 A0A087WXM4 84 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 A0A087X0T9 212 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 BBIP1A8MTZ0 92 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 J3QR89 54 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 GSTZ1O43708 216 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KLF7O75840 302 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FSTL3O95633 263 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 HRASP01112 189 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KRASP01116 189 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 INAFM2P0DMQ5 153 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 P0DMU3 169 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FAM231AP0DMU4 169 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FAM231CP0DMU5 169 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 BCL2P10415 239 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 PTHLHP12272 177 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 NFYBP25208 207 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 AKR1C1Q04828 323 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KLRD1Q13241 179 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 VMA21Q3ZAQ7 101 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 CENPWQ5EE01 88 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 KPRPQ5T749 579 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 LCE1CQ5T751 118 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 Q6AWC8 147 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 SBSNQ6UWP8 590 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 Q6ZUT4 128 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 TRAPPC6BQ86SZ2 158 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 AMN1Q8IY45 258 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C3orf56Q8N813 242 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 PPTC7Q8NI37 304 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 DCANP1Q8TF63 244 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C2orf15Q8WU43 125 aaKnown RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 RAB2BQ8WUD1 216 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C10orf82Q8WW14 230 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 GPX7Q96SL4 187 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 SLC25A21Q9BQT8 299 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 MED28Q9H204 178 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 TCEAL2Q9H3H9 227 aaPredicted RBP2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 C16orf95Q9H693 158 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 TUBA4BQ9H853 241 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 RPRMQ9NS64 109 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 FKBP11Q9NYL4 201 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 BET1LQ9NYM9 111 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 DIP2BQ9P265 1576 aa2.81□□□□□ -1.96
HMGB1P13-201ENST00000406019 ITGB4P16144 1822 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 PLEKHH2Q8IVE3 1493 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGHV3-21A0A0B4J1V1 117 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 MUC21A0A0G2JKD1 596 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR2T8A6NH00 312 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 C4orf51C9J302 202 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 SIX6O95475 246 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 CGB3P0DN86 165 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 CGB7P0DN87 165 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF32P17041 273 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 OR10J1P30954 320 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 GNG11P61952 73 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 RPS11P62280 158 aaKnown RBP eCLIP2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 SPANXN3Q5MJ09 141 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 HES3Q5TGS1 186 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 KCNRGQ8N5I3 272 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TEX29Q8N6K0 151 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TMEM75Q8N9X5 138 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 WFDC11Q8NEX6 87 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 NUP35Q8NFH5 326 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 DPH3Q96FX2 82 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TM2D3Q9BRN9 247 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 SHANK2-AS3Q9BTD1 123 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 MRPL32Q9BYC8 188 aaKnown RBP2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 PLA2G12AQ9BZM1 189 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 MARCOQ9UEW3 520 aaPredicted RBP2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 TP73-AS1Q9UF72 201 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF835Q9Y2P0 537 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 RNF11Q9Y3C5 154 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 PTPRFP10586 1907 aa2.8□□□□□ -1.96
HMGB1P13-201ENST00000406019 ARAP2Q8WZ64 1704 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 ABCA9Q8IUA7 1624 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 MROH1Q8NDA8 1641 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 ATP10BO94823 1461 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 CASKIN1Q8WXD9 1431 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 TRBV19A0A075B6N1 114 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGLC7A0M8Q6 106 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 C5orf49A4QMS7 147 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 K7EM74 188 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 K7EP34 96 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 M0R233 179 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BKO60814 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 UBL3O95164 117 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 IGLV7-43P04211 117 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BJP06899 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 ZNF286BP0CG31 522 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 IFITM1P13164 125 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H1DP16402 221 aaKnown RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BOP23527 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BBP33778 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 GUCA1AP43080 201 aaPredicted RBP2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BDP58876 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 KRTAP10-1P60331 282 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 HIST1H2BCP62807 126 aa2.79□□□□□ -1.96
HMGB1P13-201ENST00000406019 EIF5AP63241 154 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms