RNA–Protein interactions for RNA: ENST00000399903.6

PTPRA-205, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5 BASIC

Gene PTPRA, Length 3,337 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-205ENST00000399903 AP5S1Q9NUS5 200 aa13.8□□□□□ -0.2
PTPRA-205ENST00000399903 TRGV8A0A0C4DH27 118 aa13.8□□□□□ -0.2
PTPRA-205ENST00000399903 C9orf118A6NHY6 69 aa13.8□□□□□ -0.2
PTPRA-205ENST00000399903 FAM167A-AS1Q96KT0 104 aa13.8□□□□□ -0.2
PTPRA-205ENST00000399903 SH3BGRL2Q9UJC5 107 aa13.8□□□□□ -0.2
PTPRA-205ENST00000399903 REG1BP48304 166 aa13.8□□□□□ -0.2
PTPRA-205ENST00000399903 ADTRPQ96IZ2 230 aa13.8□□□□□ -0.2
PTPRA-205ENST00000399903 PPIAL4CA0A0B4J2A2 164 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 PPIAL4GP0DN37 164 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 AZU1P20160 251 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 LINC00305Q7Z4B0 112 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 WFDC12Q8WWY7 111 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 CXXC4Q9H2H0 198 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 GCSHP23434 173 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 SEC11AP67812 179 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 TMEM14BQ9NUH8 114 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 K7EP34 96 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 HOXC12P31275 282 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 TCF15Q12870 199 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 CT45A1Q5HYN5 189 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 C10orf55Q5SWW7 151 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 CIARTQ8N365 385 aaPredicted RBP13.79□□□□□ -0.2
PTPRA-205ENST00000399903 MTURNQ8N3F0 131 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 CT45A3Q8NHU0 189 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 MS4A6AQ9H2W1 248 aa13.79□□□□□ -0.2
PTPRA-205ENST00000399903 TRAV17A0A0B4J275 112 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 TEX48A0A1B0GUV7 120 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 CRXO43186 299 aaPredicted RBP13.78□□□□□ -0.2
PTPRA-205ENST00000399903 RBPJQ06330 500 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 CALYQ9NYX4 217 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 hADV38S2A0JD32 116 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 FAM106CPP0CH98 169 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 FAM106AQ4KMX7 169 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 PRNTQ86SH4 94 aa13.78□□□□□ -0.2
PTPRA-205ENST00000399903 CHD8Q9HCK8 2581 aa13.77□□□□□ -0.2
PTPRA-205ENST00000399903 A1L4Q6 167 aa13.77□□□□□ -0.2
PTPRA-205ENST00000399903 SRRM4A7MD48 611 aaKnown RBP13.77□□□□□ -0.2
PTPRA-205ENST00000399903 FAM231DQ6ZW35 169 aa13.77□□□□□ -0.2
PTPRA-205ENST00000399903 Q71RC1 249 aaPredicted RBP13.77□□□□□ -0.2
PTPRA-205ENST00000399903 JPT1Q9UK76 154 aa13.77□□□□□ -0.2
PTPRA-205ENST00000399903 EPDR1Q9UM22 224 aa13.77□□□□□ -0.2
PTPRA-205ENST00000399903 FOXA2Q9Y261 457 aaPredicted RBP13.77□□□□□ -0.2
PTPRA-205ENST00000399903 TMSB15BA0A087X1C1 80 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 TEX50A0A1B0GTY4 177 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 A0A1B0GXF2 115 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 LGALS7P47929 136 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 CACNG7P62955 275 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 GPR82Q96P67 336 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 COL6A6A6NMZ7 2263 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 FAM90A9PA6NNJ1 464 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 J3QW42 95 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 PRNDQ9UKY0 176 aa13.77□□□□□ -0.21
PTPRA-205ENST00000399903 IQCF6A8MYZ5 107 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 FABP2P12104 132 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 ATP5L2Q7Z4Y8 100 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 VSTM2AQ8TAG5 236 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 NCOR2Q9Y618 2525 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 CECR9P0C854 216 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 CSN1S1P47710 185 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 CD69Q07108 199 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 DUX4L9Q6RFH8 374 aaPredicted RBP13.76□□□□□ -0.21
PTPRA-205ENST00000399903 RBPMS2Q6ZRY4 209 aaKnown RBP13.76□□□□□ -0.21
PTPRA-205ENST00000399903 Q6ZT83 130 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 ABCA4P78363 2273 aa13.76□□□□□ -0.21
PTPRA-205ENST00000399903 A0A1W2PRD5 423 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 A0A1W2PRF3 423 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 A0A1W2PRM7 423 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 PCP2Q8IVA1 136 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 SRSF12Q8WXF0 261 aaKnown RBP13.75□□□□□ -0.21
PTPRA-205ENST00000399903 PTPRQQ9UMZ3 2332 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 UFSP1Q6NVU6 142 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 ZNF788Q6ZQV5 615 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 IGKV1D-17A0A075B6S4 117 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 H3BRM9 83 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 K7ERJ3 54 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 LOXL1Q08397 574 aaPredicted RBP13.75□□□□□ -0.21
PTPRA-205ENST00000399903 PATE2Q6UY27 113 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 PPP1R35Q8TAP8 253 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 TTTY13Q9BZ97 58 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 NPFFR1Q9GZQ6 430 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 ZNF257Q9Y2Q1 563 aa13.75□□□□□ -0.21
PTPRA-205ENST00000399903 KIR2DS2P43631 304 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 LOXL3P58215 753 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 ERHP84090 104 aaKnown RBP13.74□□□□□ -0.21
PTPRA-205ENST00000399903 PRCDQ00LT1 54 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 PRSS33Q8NF86 280 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 TNFRSF14Q92956 283 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 C18orf15Q96N68 181 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 DKK4Q9UBT3 224 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 RNASE2P10153 161 aaKnown RBP13.74□□□□□ -0.21
PTPRA-205ENST00000399903 IFI27P40305 119 aaPredicted RBP13.74□□□□□ -0.21
PTPRA-205ENST00000399903 TIMM23BQ5SRD1 257 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 MRPL32Q9BYC8 188 aaKnown RBP13.74□□□□□ -0.21
PTPRA-205ENST00000399903 IGHG3P01860 377 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 ARMS2P0C7Q2 107 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 SAA1P0DJI8 122 aaPredicted RBP13.74□□□□□ -0.21
PTPRA-205ENST00000399903 SPRNQ5BIV9 151 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 LINC01545Q5VT33 79 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 HCP5Q6MZN7 132 aa13.74□□□□□ -0.21
PTPRA-205ENST00000399903 SEM1Q6ZVN7 128 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 135.8 ms