RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 IGHV1-8P0DP01 117 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 FUSP35637 526 aaKnown RBP eCLIP2.26□□□□□ -2.05
CHD9-202ENST00000398510 TMEM170BQ5T4T1 132 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 C1QL4Q86Z23 238 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 VOPP1Q96AW1 172 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 TRBV20-1A0A075B6N2 111 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 A0A0J9YW62 118 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 ZNF98A6NK75 572 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 PATE3B3GLJ2 98 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 FSTL3O95633 263 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 CCL18P55774 89 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 ANKRD34AQ69YU3 496 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 RFESDQ8TAC1 157 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 MRPL20Q9BYC9 149 aaKnown RBP2.26□□□□□ -2.05
CHD9-202ENST00000398510 IGHV3-43A0A0B4J1X8 118 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 DANCRP0C864 163 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 SAA1P0DJI8 122 aaPredicted RBP2.26□□□□□ -2.05
CHD9-202ENST00000398510 IGHV3-43DP0DP04 118 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 VSIG8P0DPA2 414 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 HERVK_113P63121 156 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 C11orf44Q8N8P7 122 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 MPZP25189 248 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 CBLN3Q6UW01 205 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 FGFRL1Q8N441 504 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 RCHY1Q96PM5 261 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 CCL28Q9NRJ3 127 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 IL17BQ9UHF5 180 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 ZNF706Q9Y5V0 76 aaPredicted RBP2.26□□□□□ -2.05
CHD9-202ENST00000398510 TRAV8-1A0A0A6YYK1 113 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 TRAV3A0A0B4J244 114 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 MPTX1A8MV57 137 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 I3L3M4 83 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 VCYO14598 125 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 CDKN1BP46527 198 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 C8orf82Q6P1X6 216 aaPredicted RBP2.26□□□□□ -2.05
CHD9-202ENST00000398510 ODF3L1Q8IXM7 274 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 PLPPR1Q8TBJ4 325 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 WFDC12Q8WWY7 111 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 CCDC140Q96MF4 163 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 HCSTQ9UBK5 93 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 TRAV1-1A0A0B4J248 108 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 LOC107984156A0A0G2JMH3 177 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 SHISA8B8ZZ34 492 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 H7C423 109 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 SOCS1O15524 211 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 DPM2O94777 84 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 LHBP01229 141 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 IGHG3P01860 377 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 ZNF138P52744 262 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 ZNF474Q6S9Z5 364 aaPredicted RBP2.26□□□□□ -2.05
CHD9-202ENST00000398510 FOXI2Q6ZQN5 318 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 ARL17AQ8IVW1 177 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 DMRTC2Q8IXT2 367 aaPredicted RBP2.26□□□□□ -2.05
CHD9-202ENST00000398510 OR13C6PQ8NH95 151 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 BUB1B-PAK6H3BSN5 160 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 SLC17A3O00476 420 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 FSHBP01225 129 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 FBXL15Q9H469 300 aa2.26□□□□□ -2.05
CHD9-202ENST00000398510 IGHV3OR15-7A0A075B7D8 119 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.25□□□□□ -2.05
CHD9-202ENST00000398510 NTN1O95631 604 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 PDE6GP18545 87 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 NTF4P34130 210 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 SRSF6Q13247 344 aaKnown RBP2.25□□□□□ -2.05
CHD9-202ENST00000398510 MORN2Q502X0 79 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 THSD4Q6ZMP0 1018 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 ZNF114Q8NC26 417 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 GPR146Q96CH1 333 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 LYZL4Q96KX0 146 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 RPUSD1Q9UJJ7 312 aaKnown RBP2.25□□□□□ -2.05
CHD9-202ENST00000398510 TRAV24A0A0B4J272 114 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 A0A1W2PR80 420 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 CD5LO43866 347 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 C1QTNF9P0C862 333 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 GLI4P10075 376 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 RHOHQ15669 191 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 NSUN5P1Q3KNT7 163 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 LINC01551Q86U37 167 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 ATOH7Q8N100 152 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 TMEM52Q8NDY8 209 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 GGTLC1Q9BX51 225 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 MIXL1Q9H2W2 232 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 Q9H3A6 140 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 NDUFB1O75438 58 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 RNASE4P34096 147 aaKnown RBP2.25□□□□□ -2.05
CHD9-202ENST00000398510 PTGER1P34995 402 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 TMEM187Q14656 261 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 ZFP2Q6ZN57 461 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 ZNF493Q6ZR52 646 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 GOLT1AQ6ZVE7 132 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 NDUFA11Q86Y39 141 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 PYGO2Q9BRQ0 406 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 FAM60AQ9NP50 221 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 MRPL27Q9P0M9 148 aaKnown RBP2.25□□□□□ -2.05
CHD9-202ENST00000398510 KAAG1Q9UBP8 84 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 CSPG4Q6UVK1 2322 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 TMEM178BH3BS89 294 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 Q6ZS92 163 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 ATP6V0E2Q8NHE4 81 aa2.25□□□□□ -2.05
CHD9-202ENST00000398510 SIGLEC9Q9Y336 463 aa2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms