RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 RBMY1BA6NDE4 496 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-207ENST00000397411 RBMY1EA6NEQ0 496 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-207ENST00000397411 RBMY1DP0C7P1 496 aaKnown RBP18.89■□□□□ 0.61
TSPAN4-207ENST00000397411 PET100P0DJ07 73 aa18.89■□□□□ 0.61
TSPAN4-207ENST00000397411 ODF3L2Q3SX64 289 aa18.89■□□□□ 0.61
TSPAN4-207ENST00000397411 OR5AC2Q9NZP5 309 aa18.89■□□□□ 0.61
TSPAN4-207ENST00000397411 FBXL17Q9UF56 701 aa18.89■□□□□ 0.61
TSPAN4-207ENST00000397411 LOC102724200A0A096LPH7 203 aaPredicted RBP18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 RAP2BP61225 183 aa18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 ATP6V1FQ16864 119 aa18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 APRG1Q8IVJ8 170 aa18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 OR8I2Q8N0Y5 310 aa18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 FAM110AQ9BQ89 295 aa18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 DOK5Q9P104 306 aa18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 U3KQK5 164 aa18.88■□□□□ 0.61
TSPAN4-207ENST00000397411 HYPMO75409 117 aa18.87■□□□□ 0.61
TSPAN4-207ENST00000397411 OR5G3P0C626 314 aa18.87■□□□□ 0.61
TSPAN4-207ENST00000397411 LINC00869P0C866 280 aa18.87■□□□□ 0.61
TSPAN4-207ENST00000397411 C1orf194Q5T5A4 169 aa18.87■□□□□ 0.61
TSPAN4-207ENST00000397411 S100A7AQ86SG5 101 aa18.87■□□□□ 0.61
TSPAN4-207ENST00000397411 SLC45A2Q9UMX9 530 aa18.87■□□□□ 0.61
TSPAN4-207ENST00000397411 H0YIZ8 118 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 K7EQG2 157 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 AGPAT2O15120 278 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 ZNF546Q86UE3 836 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 GGTLC1Q9BX51 225 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 SLC25A22Q9H936 323 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 MAP6D1Q9H9H5 199 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 HIGD1AQ9Y241 93 aa18.86■□□□□ 0.61
TSPAN4-207ENST00000397411 MPC2O95563 127 aa18.85■□□□□ 0.61
TSPAN4-207ENST00000397411 DEFB131AP59861 70 aa18.85■□□□□ 0.61
TSPAN4-207ENST00000397411 NHLH2Q02577 135 aa18.85■□□□□ 0.61
TSPAN4-207ENST00000397411 LINC00322Q6ZN03 302 aaPredicted RBP18.85■□□□□ 0.61
TSPAN4-207ENST00000397411 CITED4Q96RK1 184 aa18.85■□□□□ 0.61
TSPAN4-207ENST00000397411 SPATA25Q9BR10 227 aa18.85■□□□□ 0.61
TSPAN4-207ENST00000397411 ARL6Q9H0F7 186 aa18.85■□□□□ 0.61
TSPAN4-207ENST00000397411 CAMLGP49069 296 aa18.84■□□□□ 0.61
TSPAN4-207ENST00000397411 EWSR1Q01844 656 aaKnown RBP eCLIP18.84■□□□□ 0.611e-6■■■■□ 25.6
TSPAN4-207ENST00000397411 BAXQ07812 192 aa18.84■□□□□ 0.61
TSPAN4-207ENST00000397411 FCN2Q15485 313 aa18.84■□□□□ 0.61
TSPAN4-207ENST00000397411 RNF126Q9BV68 326 aa18.84■□□□□ 0.61
TSPAN4-207ENST00000397411 NRN1Q9NPD7 142 aa18.84■□□□□ 0.61
TSPAN4-207ENST00000397411 UBE2L5PA0A1B0GUS4 154 aa18.83■□□□□ 0.6
TSPAN4-207ENST00000397411 ZNF688P0C7X2 276 aa18.83■□□□□ 0.6
TSPAN4-207ENST00000397411 CXCL3P19876 107 aa18.83■□□□□ 0.6
TSPAN4-207ENST00000397411 STPG3Q8N7X2 389 aa18.83■□□□□ 0.6
TSPAN4-207ENST00000397411 MGST2Q99735 147 aa18.83■□□□□ 0.6
TSPAN4-207ENST00000397411 TM2D3Q9BRN9 247 aa18.83■□□□□ 0.6
TSPAN4-207ENST00000397411 ZNF98A6NK75 572 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 RPL35AP18077 110 aaKnown RBP18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 GALR1P47211 349 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 APOC4P55056 127 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 PXDC1Q5TGL8 231 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 FAM24BQ8N5W8 94 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 OR5C1Q8NGR4 320 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 THAP6Q8TBB0 222 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 RCHY1Q96PM5 261 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 WDR83OSQ9Y284 106 aa18.82■□□□□ 0.6
TSPAN4-207ENST00000397411 FGF7P21781 194 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 PLP1P60201 277 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 SNRPD3P62318 126 aaKnown RBP18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 OXA1LQ15070 435 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 ZNF124Q15973 351 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 VWC2Q2TAL6 325 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 LEMD1Q68G75 181 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 Q6ZRG5 221 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 DCANP1Q8TF63 244 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 SLC25A39Q9BZJ4 359 aaPredicted RBP18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 MBD2Q9UBB5 411 aa18.81■□□□□ 0.6
TSPAN4-207ENST00000397411 CLINT1Q14677 625 aa18.8■□□□□ 0.6
TSPAN4-207ENST00000397411 OR11H7Q8NGC8 314 aa18.8■□□□□ 0.6
TSPAN4-207ENST00000397411 GPR82Q96P67 336 aa18.8■□□□□ 0.6
TSPAN4-207ENST00000397411 RNF24Q9Y225 148 aa18.8■□□□□ 0.6
TSPAN4-207ENST00000397411 COX7A2P2O60397 106 aa18.79■□□□□ 0.6
TSPAN4-207ENST00000397411 ID1P41134 155 aa18.79■□□□□ 0.6
TSPAN4-207ENST00000397411 PSMG4Q5JS54 123 aa18.79■□□□□ 0.6
TSPAN4-207ENST00000397411 SHANK2-AS3Q9BTD1 123 aa18.79■□□□□ 0.6
TSPAN4-207ENST00000397411 SCRT1Q9BWW7 348 aa18.79■□□□□ 0.6
TSPAN4-207ENST00000397411 ARV1Q9H2C2 271 aa18.79■□□□□ 0.6
TSPAN4-207ENST00000397411 SLC25A32Q9H2D1 315 aa18.79■□□□□ 0.6
TSPAN4-207ENST00000397411 RPL12P30050 165 aaKnown RBP18.78■□□□□ 0.6
TSPAN4-207ENST00000397411 MIC13Q5XKP0 118 aa18.78■□□□□ 0.6
TSPAN4-207ENST00000397411 STHQ8IWL8 128 aa18.78■□□□□ 0.6
TSPAN4-207ENST00000397411 RSG1Q9BU20 258 aa18.78■□□□□ 0.6
TSPAN4-207ENST00000397411 H3BRN7 92 aa18.77■□□□□ 0.6
TSPAN4-207ENST00000397411 MPDU1O75352 247 aa18.77■□□□□ 0.6
TSPAN4-207ENST00000397411 LINC00052Q96N35 136 aa18.77■□□□□ 0.6
TSPAN4-207ENST00000397411 UHRF2Q96PU4 802 aa18.77■□□□□ 0.6
TSPAN4-207ENST00000397411 SEPSECSQ9HD40 501 aaKnown RBP18.77■□□□□ 0.6
TSPAN4-207ENST00000397411 ELOA3CA0A087WX78 387 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 UBE2CO00762 179 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 ATF4P18848 351 aaPredicted RBP18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 FGL1Q08830 312 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 C10orf113Q5VZT2 155 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 ZNF709Q8N972 641 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 OR1L4Q8NGR5 311 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 ASB13Q8WXK3 278 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 HSPB11Q9Y547 144 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 DNAH9Q9NYC9 4486 aa18.76■□□□□ 0.59
TSPAN4-207ENST00000397411 RPL7P18124 248 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms