RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 PEF1Q9UBV8 284 aaKnown RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 SS18L2Q9UHA2 77 aa4.31□□□□□ -1.72
VPS41-203ENST00000395969 INTS1Q8N201 2190 aaKnown RBP4.31□□□□□ -1.72
VPS41-203ENST00000395969 A0A087X0K7 114 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 PRSS29PA6NIE9 313 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 SH2D7A6NKC9 451 aaPredicted RBP4.3□□□□□ -1.72
VPS41-203ENST00000395969 M0R1X1 148 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 UPK2O00526 184 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 NDUFA3O95167 84 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 FAM87AP0C7U9 286 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 SSTR5P35346 364 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 OPRK1P41145 380 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 PSG3Q16557 428 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 NEGR1Q7Z3B1 354 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 MTURNQ8N3F0 131 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 Q8N6K4 173 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 ZNF714Q96N38 554 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 OR2D2Q9H210 308 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 SCRT2Q9NQ03 307 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 PEMTQ9UBM1 199 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 CTSZQ9UBR2 303 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 DUSP13Q9UII6 198 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 A0A1W2PPV4 95 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 HELTA6NFD8 242 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 C15orf62A8K5M9 175 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 GHRHP01286 108 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 CT45A6P0DMU7 189 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 CT45A5P0DMU8 189 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 CT45A7P0DMV0 189 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 NPY1RP25929 384 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 CRYBB3P26998 211 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 GPR6P46095 362 aaPredicted RBP4.3□□□□□ -1.72
VPS41-203ENST00000395969 PLP1P60201 277 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 FAM120AOSQ5T036 256 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 MINOS1Q5TGZ0 78 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 THAP8Q8NA92 274 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 OR9G1Q8NH87 305 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 VSTM2AQ8TAG5 236 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 SAP30LQ9HAJ7 183 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 HILPDAQ9Y5L2 63 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 MINOS1-NBL1R4GNA1 71 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 ISLRO14498 428 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 APCSP02743 223 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 SAA2P0DJI9 122 aaPredicted RBP4.3□□□□□ -1.72
VPS41-203ENST00000395969 CKS1BP61024 79 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 DGAT2L7PQ6IED9 249 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 RBPMS2Q6ZRY4 209 aaKnown RBP4.3□□□□□ -1.72
VPS41-203ENST00000395969 C1orf229Q6ZS94 237 aaPredicted RBP4.3□□□□□ -1.72
VPS41-203ENST00000395969 C5orf17Q8NAS9 161 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 RAX2Q96IS3 184 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 NDUFA4L2Q9NRX3 87 aa4.3□□□□□ -1.72
VPS41-203ENST00000395969 RALYQ9UKM9 306 aaKnown RBP4.3□□□□□ -1.72
VPS41-203ENST00000395969 AMMECR1Q9Y4X0 333 aaPredicted RBP4.3□□□□□ -1.72
VPS41-203ENST00000395969 A0A1B0GV72 72 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 hDV102S1A0JD36 115 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 IZUMO1RA6ND01 250 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 OR4C46A6NHA9 309 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 ZNF785A8K8V0 405 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 IGHV1-8P0DP01 117 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 USF1P22415 310 aaPredicted RBP4.29□□□□□ -1.72
VPS41-203ENST00000395969 GPR12P47775 334 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 HIST1H1AQ02539 215 aaPredicted RBP4.29□□□□□ -1.72
VPS41-203ENST00000395969 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
VPS41-203ENST00000395969 SLC25A34Q6PIV7 304 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 GTF2H5Q6ZYL4 71 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 FAM110DQ8TAY7 271 aaPredicted RBP4.29□□□□□ -1.72
VPS41-203ENST00000395969 NABP2Q9BQ15 211 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 TMEM70Q9BUB7 260 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 RAB1BQ9H0U4 201 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 TNFRSF19Q9NS68 423 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 AP5S1Q9NUS5 200 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 M0R2Z0 102 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 OR2J3O76001 311 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 GCHFRP30047 84 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 HSPE1P61604 102 aaKnown RBP4.29□□□□□ -1.72
VPS41-203ENST00000395969 ANXA2RQ3ZCQ2 193 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 PRAMEF5Q5TYX0 476 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 HCP5Q6MZN7 132 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 UBALD1Q8TB05 177 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 URB1-AS1Q96HZ7 61 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 TMEM133Q9H2Q1 129 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 HIF1ANQ9NWT6 349 aa4.29□□□□□ -1.72
VPS41-203ENST00000395969 RP1L1Q8IWN7 2480 aaPredicted RBP4.29□□□□□ -1.72
VPS41-203ENST00000395969 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP4.28□□□□□ -1.72
VPS41-203ENST00000395969 PSMB11A5LHX3 300 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 H3BUT2 72 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 K7EQM0 130 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 CCL21O00585 134 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 NDUFB3O43676 98 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 HSBP1O75506 76 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 RBMXL2O75526 392 aaKnown RBP4.28□□□□□ -1.72
VPS41-203ENST00000395969 IGLV2-8P01709 118 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 SMIM17P0DL12 118 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 G6PCP35575 357 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 CAMPP49913 170 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 EDDM3BP56851 147 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 DSCR9P59020 149 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 PRR20EP86478 221 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 PRR20CP86479 221 aa4.28□□□□□ -1.72
VPS41-203ENST00000395969 PRR20DP86480 221 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 127.4 ms