RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 TRAV5A0A0B4J249 113 aa15.74■□□□□ 0.11
VCPKMT-202ENST00000395860 RAB19A4D1S5 217 aa15.74■□□□□ 0.11
VCPKMT-202ENST00000395860 BMPR1BO00238 502 aa15.74■□□□□ 0.11
VCPKMT-202ENST00000395860 LGALS1P09382 135 aaKnown RBP15.74■□□□□ 0.11
VCPKMT-202ENST00000395860 SLC25A39Q9BZJ4 359 aaPredicted RBP15.74■□□□□ 0.11
VCPKMT-202ENST00000395860 ZFAND3Q9H8U3 227 aa15.74■□□□□ 0.11
VCPKMT-202ENST00000395860 IGHV3OR16-8A0A075B7F1 116 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 HAX1O00165 279 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 GGCTO75223 188 aaKnown RBP15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 KHDC1LQ5JSQ8 128 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 S100A7AQ86SG5 101 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 WIPF2Q8TF74 440 aaPredicted RBP15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 FAM210AQ96ND0 272 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 SLC25A2Q9BXI2 301 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 RABAC1Q9UI14 185 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 RNF114Q9Y508 228 aa15.73■□□□□ 0.11
VCPKMT-202ENST00000395860 OR7C2O60412 319 aa15.72■□□□□ 0.11
VCPKMT-202ENST00000395860 TCTEX1D4Q5JR98 221 aa15.72■□□□□ 0.11
VCPKMT-202ENST00000395860 PQLC2Q6ZP29 291 aa15.72■□□□□ 0.11
VCPKMT-202ENST00000395860 GNG13Q9P2W3 67 aa15.72■□□□□ 0.11
VCPKMT-202ENST00000395860 PSMB3P49720 205 aa15.72■□□□□ 0.11
VCPKMT-202ENST00000395860 GUK1Q16774 197 aa15.72■□□□□ 0.11
VCPKMT-202ENST00000395860 EIF5A2Q9GZV4 153 aaKnown RBP15.72■□□□□ 0.11
VCPKMT-202ENST00000395860 CLPSL1A2RUU4 121 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 H3BRN7 92 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 NDUFA4O00483 81 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 GCHFRP30047 84 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 CDX1P47902 265 aaPredicted RBP15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 HAGHQ16775 308 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 TOR2AQ5JU69 321 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 FAM167A-AS1Q96KT0 104 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 SHANK2-AS3Q9BTD1 123 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 SCRT1Q9BWW7 348 aa15.71■□□□□ 0.11
VCPKMT-202ENST00000395860 ATP6V1G1O75348 118 aa15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 IFNA1P01562 189 aa15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 S100A7P31151 101 aa15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 LEMD1Q68G75 181 aa15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 EIF4E3Q8N5X7 224 aaKnown RBP15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 C20orf24Q9BUV8 137 aa15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 RBFOX3A6NFN3 312 aa15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 ZNF503Q96F45 646 aa15.7■□□□□ 0.1
VCPKMT-202ENST00000395860 PPT1P50897 306 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 SRSF3P84103 164 aaKnown RBP15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 UQCC3Q6UW78 93 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 STXBP6Q8NFX7 210 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 RARRES2Q99969 163 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 PAXXQ9BUH6 204 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 OR51M1Q9H341 326 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 TMEM231Q9H6L2 316 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 MANBALQ9NQG1 85 aa15.69■□□□□ 0.1
VCPKMT-202ENST00000395860 NF1P21359 2839 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 ZNF98A6NK75 572 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 I3L521 148 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 OR10J4P0C629 311 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 CD28P10747 220 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 PMS2P11Q13670 270 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 RPEL1Q2QD12 228 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 C18orf65Q6ZTR6 163 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 C11orf44Q8N8P7 122 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 C4orf3Q8WVX3 66 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 METTL26Q96S19 204 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 TREM1Q9NP99 234 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 TMEM167BQ9NRX6 74 aa15.68■□□□□ 0.1
VCPKMT-202ENST00000395860 HSPB1P04792 205 aaKnown RBP15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 PYYP10082 97 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 BCL2P10415 239 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 PROK1P58294 105 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 UBE2L3P68036 154 aaKnown RBP15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 PEA15Q15121 130 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 UNQ9165/PRO28630Q6UXU0 137 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 IGHV4OR15-8A0A075B7B6 117 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 A0A087WW49 117 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 LOC102723971A0A1B0GUV8 181 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 ZNF320A2RRD8 509 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 ZNF207O43670 478 aaKnown RBP15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 NPPCP23582 126 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 FAM106AQ4KMX7 169 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 KLHL30-AS1Q8NEE0 82 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 WFDC12Q8WWY7 111 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 RNF24Q9Y225 148 aa15.67■□□□□ 0.1
VCPKMT-202ENST00000395860 UBE2G2P60604 165 aa15.66■□□□□ 0.1
VCPKMT-202ENST00000395860 ZNF506Q5JVG8 444 aa15.66■□□□□ 0.1
VCPKMT-202ENST00000395860 GPHB5Q86YW7 130 aa15.66■□□□□ 0.1
VCPKMT-202ENST00000395860 TMEM190Q8WZ59 177 aa15.66■□□□□ 0.1
VCPKMT-202ENST00000395860 PAGE4O60829 102 aa15.65■□□□□ 0.1
VCPKMT-202ENST00000395860 CD5P06127 495 aa15.65■□□□□ 0.1
VCPKMT-202ENST00000395860 TAGLN2P37802 199 aaKnown RBP15.65■□□□□ 0.1
VCPKMT-202ENST00000395860 HIST2H2BDQ6DRA6 164 aa15.65■□□□□ 0.1
VCPKMT-202ENST00000395860 BPIFA4PQ86YQ2 179 aa15.65■□□□□ 0.1
VCPKMT-202ENST00000395860 RXFP4Q8TDU9 374 aa15.65■□□□□ 0.1
VCPKMT-202ENST00000395860 VAX2Q9UIW0 290 aa15.65■□□□□ 0.1
VCPKMT-202ENST00000395860 GP9P14770 177 aa15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 CRYBB3P26998 211 aa15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 ICAM4Q14773 271 aa15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 DEFB136Q30KP8 78 aa15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 FXYD5Q96DB9 178 aa15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 NARS2Q96I59 477 aaKnown RBP15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 CITED2Q99967 270 aaPredicted RBP15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 TMEM14CQ9P0S9 112 aa15.64■□□□□ 0.1
VCPKMT-202ENST00000395860 A0A1B0GUS0 222 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms