RNA–Protein interactions for RNA: ENST00000394963.8

SMARCD1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCD1, Length 3,658 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-202ENST00000394963 C17orf77Q96MU5 243 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 NAGKQ9UJ70 344 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 TRBV20OR9-2A0A075B6H5 130 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 A0A1B0GW64 132 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 H3BUX3 64 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 FOXA3P55318 350 aaPredicted RBP12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 C15orf32Q32M92 178 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 OR1P1Q8NH06 330 aa12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 LSM4Q9Y4Z0 139 aaKnown RBP12.67□□□□□ -0.38
SMARCD1-202ENST00000394963 KRTDAPP60985 99 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 ZNF600Q6ZNG1 722 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 PGLYRP4Q96LB8 373 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 NOL4LQ96MY1 436 aaPredicted RBP12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 BATFQ16520 125 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 TCF24Q7RTU0 167 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 BPIFA4PQ86YQ2 179 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 PACRGQ96M98 296 aaPredicted RBP12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 Q9H3A6 140 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 IGHV4-30-2A0A087WSY4 118 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 GPX4P36969 197 aaPredicted RBP12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 LINC00518Q8N0U6 118 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 PRORYQ9H606 182 aa12.66□□□□□ -0.38
SMARCD1-202ENST00000394963 CORTO00230 105 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 PEX7O00628 323 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 CRISP2P16562 243 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 TEX38Q6PEX7 206 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 WFDC12Q8WWY7 111 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 NCOR1P1Q9H4R4 102 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 CELSR1Q9NYQ6 3014 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 ZNF253O75346 499 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 NDUFB8O95169 186 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 GBGT1Q8N5D6 347 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 RNF125Q96EQ8 232 aa12.65□□□□□ -0.38
SMARCD1-202ENST00000394963 ELOA3CA0A087WX78 387 aaPredicted RBP12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 A0A1B0GWJ7 208 aa12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 K7EQM0 130 aa12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 P01737 135 aa12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 TRGV3P03979 118 aa12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 FRMD6-AS1P0C7T7 363 aa12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 TPPP2P59282 170 aa12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 TNFRSF14Q92956 283 aa12.65□□□□□ -0.39
SMARCD1-202ENST00000394963 CELSR2Q9HCU4 2923 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 LINC01548A6NM66 108 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 CHEK1O14757 476 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 GGCTO75223 188 aaKnown RBP12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 DLX6P56179 175 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 PRR20EP86478 221 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 PRR20CP86479 221 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 PRR20DP86480 221 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 PRR20BP86481 221 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 PRR20AP86496 221 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 POU2AF1Q16633 256 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 BEND2Q8NDZ0 799 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 DSCAML1Q8TD84 2053 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 RNF223E7ERA6 249 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 ATP6V0E1O15342 81 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 FBXL19-AS1Q494R0 122 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 CIARTQ8N365 385 aaPredicted RBP12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 NPFFO15130 113 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 LINC00311Q8N616 119 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 NEU1Q99519 415 aa12.64□□□□□ -0.39
SMARCD1-202ENST00000394963 MRPL18Q9H0U6 180 aaKnown RBP12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 RNF224P0DH78 156 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 FBLN7Q53RD9 439 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 PATE2Q6UY27 113 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 OR5R1Q8NH85 324 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 SLC25A39Q9BZJ4 359 aaPredicted RBP12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 SEC14L6B5MCN3 397 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 TGOLN2O43493 480 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 TCTAP57738 103 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 SP5Q6BEB4 398 aaPredicted RBP12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 RNF2Q99496 336 aa12.63□□□□□ -0.39
SMARCD1-202ENST00000394963 TRAV20A0A0B4J274 112 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 IGKV3-20P01619 116 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 IGHV2-5P01817 119 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 ORM1P02763 201 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 IGHV4-38-2P0DP08 117 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 HTN1P15515 57 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 RNASEKQ6P5S7 137 aaKnown RBP12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 BCL6BQ8N143 479 aaPredicted RBP12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 VWC2Q2TAL6 325 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 Q8TAT8 98 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 SLC25A2Q9BXI2 301 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 TUBA4BQ9H853 241 aa12.62□□□□□ -0.39
SMARCD1-202ENST00000394963 A0A087WWC5 75 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 CXorf65A6NEN9 183 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 IL17RELQ6ZVW7 336 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 C1orf159Q96HA4 380 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 HSPB9Q9BQS6 159 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 BSNQ9UPA5 3926 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 HOXB4P17483 251 aaPredicted RBP12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 PPIFP30405 207 aaKnown RBP12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 TMEM95Q3KNT9 176 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 HIST2H2BDQ6DRA6 164 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 BTF3L4Q96K17 158 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 TCEAL7Q9BRU2 100 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 RABAC1Q9UI14 185 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 HRNRQ86YZ3 2850 aaPredicted RBP12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 AMTP48728 403 aa12.61□□□□□ -0.39
SMARCD1-202ENST00000394963 BBC3Q96PG8 261 aaPredicted RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms